Factsheet for HORVU5Hr1G123110.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G548700.1	Wheat	plastid	90.73	92.58
TraesCS4A01G326700.1	Wheat	plastid	93.98	91.69
TraesCS5B01G539600.1	Wheat	plastid	88.47	90.28
HORVU5Hr1G039730.1	Barley	plastid	79.45	82.34
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	30.83	75.0
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	29.07	73.42
VIT_12s0034g00180.t01	Wine grape	cytosol	18.05	67.92
Solyc06g053480.2.1	Tomato	plastid	67.42	67.76
PGSC0003DMT400002555	Potato	plastid	66.67	67.68
PGSC0003DMT400042118	Potato	plastid	66.67	67.0
Solyc03g063110.2.1	Tomato	plastid	65.91	66.92
VIT_00s0499g00030.t01	Wine grape	plastid	65.41	66.41
KRH71270	Soybean	endoplasmic reticulum, nucleus	64.41	65.73
Solyc11g008680.1.1	Tomato	plastid	64.66	65.65
PGSC0003DMT400041874	Potato	plastid	64.41	65.39
VIT_05s0094g00750.t01	Wine grape	plastid	52.88	65.33
KXG30261	Sorghum	plastid	67.92	65.14
GSMUA_Achr7P22860_001	Banana	plastid	58.65	64.82
KRH50195	Soybean	plastid	65.16	64.68
CDY44250	Canola	plastid	64.41	64.41
AT2G43710.1	Thale cress	plastid	64.66	64.34
Bra000321.1-P	Field mustard	plastid	64.16	64.32
CDX83464	Canola	plastid	64.16	64.32
CDY17916	Canola	plastid	64.16	64.16
CDX79807	Canola	plastid	63.91	63.59
Bra004778.1-P	Field mustard	plastid	63.66	63.34
GSMUA_Achr8P08750_001	Banana	plastid	55.89	63.17
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	69.67	62.47
Zm00001d050552_P001	Maize	plastid	67.42	61.14
Os02t0504800-01	Rice	plastid	49.12	60.87
HORVU3Hr1G091320.2	Barley	plastid	54.89	57.94
HORVU3Hr1G094050.3	Barley	plastid	66.42	56.99
GSMUA_Achr5P25160_001	Banana	plastid	55.39	56.09
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	44.86	55.76
VIT_12s0034g00190.t01	Wine grape	extracellular	21.8	52.1
HORVU2Hr1G012780.1	Barley	mitochondrion	46.62	46.27
HORVU2Hr1G012600.2	Barley	mitochondrion	46.62	46.04
HORVU2Hr1G006990.1	Barley	plastid	43.86	42.79
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	46.62	42.66
HORVU5Hr1G068310.1	Barley	plastid	45.61	42.52
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	46.62	42.27

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A287T0Q9	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G123110	EnsemblPlants:HORVU5Hr1G123110.1	InterPro:IPR012348	PFAM:PF03405
PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI000B4653FA	:	:	:	:	:

Description

Acyl-[acyl-carrier-protein] desaturase [Source:UniProtKB/TrEMBL;Acc:A0A287T0Q9]

Coordinates

chrchr5H:+:663379391..663381062

Molecular Weight (calculated)

45607.5 Da

IEP (calculated)

6.998

GRAVY (calculated)

-0.450

Length

399 amino acids

Sequence
(BLAST)

001: PSNRKRPTMH LTAPLPSCRA FQAPLWCSCL RSKITVMATA SKAKDGVPGM AFSPRKAPHR DRVAHTLPPE KREIFDSLNS WAEDNLLVLL KPVERSWQPQ
101: DYLPDPSLDR FYDEVKELRE RAEEIPDDYL VCLVGDMVTE EALPTYQKML NILDGGVRDE TGSSPTSWAI WTRAWTAEEN RHGDLMNKYI YLTGRVDMRQ
201: VEKTIQYLVG AGMDPRTEAN PYEFFIYTSF QERATFISHG NTARHARKYG DQKLAQICGT IAADERRHEL AYTKIVEKLF EVDPDYTIQA FASIMKKKIT
301: MPAHLMYDGE EDNLFEHFSA VAQRLGVYTA VDYADILEFL IQRWNVAGLI GLSGEGRRAQ DYLCSLGPRF RKLVERGQGS GKQLPVVPFS WIYGRQVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.