Factsheet for AT3G02630.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92006	Canola	plastid	95.96	95.96
Bra001057.1-P	Field mustard	plastid	95.45	95.45
CDX74242	Canola	plastid	95.45	95.45
CDY34739	Canola	plastid	64.9	94.49
Bra021427.1-P	Field mustard	plastid	93.94	94.18
AT5G16240.1	Thale cress	plastid	85.86	86.29
VIT_05s0094g00550.t01	Wine grape	cytosol	51.52	78.16
VIT_05s0094g00730.t01	Wine grape	plastid	67.93	74.31
AT2G43710.1	Thale cress	plastid	73.74	72.82
VIT_05s0094g00580.t01	Wine grape	plastid	66.16	72.38
VIT_05s0094g00740.t01	Wine grape	plastid	59.6	66.11
AT5G16230.1	Thale cress	plastid	65.15	64.34
AT3G02610.2	Thale cress	plastid	65.91	63.2
AT1G43800.1	Thale cress	plastid	61.62	62.4
AT3G02620.2	Thale cress	plastid	63.89	62.32
VIT_05s0094g00650.t01	Wine grape	plastid	60.1	59.06
GSMUA_Achr5P25180_001	Banana	cytosol	21.21	50.91
VIT_05s0094g00630.t01	Wine grape	plastid	20.96	49.4

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	EntrezGene:820773	UniProt:A0A178VB94	ProteinID:AAF32470.1	ProteinID:AEE73841.1
ArrayExpress:AT3G02630	EnsemblPlantsGene:AT3G02630	RefSeq:AT3G02630	TAIR:AT3G02630	RefSeq:AT3G02630-TAIR-G	EnsemblPlants:AT3G02630.1
TAIR:AT3G02630.1	EMBL:AY087294	EMBL:AY099784	EMBL:AY128883	Unigene:At.18818	InterPro:Fatty_acid_desaturase-2
InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	GO:GO:0102786	InterPro:IPR012348
RefSeq:NP_186912.1	ProteinID:OAP02938.1	PFAM:PF03405	PIRSF:PIRSF000346	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR31155
PANTHER:PTHR31155:SF6	UniProt:Q9M879	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0000048696	:

Description

S-ACP-DES5Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M879]

Coordinates

chr3:+:562030..564870

Molecular Weight (calculated)

45305.0 Da

IEP (calculated)

6.136

GRAVY (calculated)

-0.484

Length

396 amino acids

Sequence
(BLAST)

001: MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.