Factsheet for Os07t0596600-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G182800.1	Wheat	plastid	83.03	84.83
HORVU2Hr1G034440.3	Barley	plastid	82.6	84.03
TraesCS2D01G190600.1	Wheat	plastid	82.18	83.96
TraesCS2B01G209300.1	Wheat	plastid	81.9	83.67
OQU90194	Sorghum	plastid	83.17	83.05
Zm00001d006759_P012	Maize	plastid	80.91	79.33
Zm00001d022041_P001	Maize	plastid	79.63	75.17
Os07t0668000-00	Rice	cytosol, plasma membrane	2.97	67.74
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	60.11	64.2
CDY71137	Canola	plastid	39.46	63.99
GSMUA_Achr6P24660_001	Banana	nucleus	58.56	63.5
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	59.69	60.37
VIT_17s0000g06650.t01	Wine grape	plastid	58.56	60.35
GSMUA_Achr4P03350_001	Banana	nucleus	56.58	59.97
KRH54601	Soybean	plastid	57.28	59.65
KRH63286	Soybean	nucleus	56.86	59.64
Solyc03g115660.2.1	Tomato	nucleus	56.86	58.18
PGSC0003DMT400063133	Potato	nucleus	56.72	57.78
KRH56877	Soybean	nucleus, plastid	54.31	57.31
KRH03527	Soybean	nucleus, plastid	54.6	56.85
KRH18441	Soybean	nucleus	44.13	53.15
KRG93581	Soybean	plastid	43.99	53.07
CDX83825	Canola	plastid	52.48	52.85
CDX73077	Canola	cytosol	47.67	52.74
Bra015920.1-P	Field mustard	cytosol	47.52	52.58
CDX96534	Canola	cytosol	47.38	52.43
CDX81891	Canola	plastid	51.63	52.29
AT1G18670.3	Thale cress	nucleus	52.62	51.67
AT1G74330.1	Thale cress	nucleus	51.06	51.65
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	47.1	50.68
CDX96706	Canola	nucleus	52.33	49.93
PGSC0003DMT400003634	Potato	plastid	46.82	49.92
Bra016547.1-P	Field mustard	nucleus	52.19	49.73
VIT_14s0108g01270.t01	Wine grape	nucleus	50.07	49.72
Os01t0367700-01	Rice	plasma membrane	38.33	48.57
KRH01235	Soybean	nucleus, plastid	45.83	48.14
AT5G39420.1	Thale cress	nucleus	43.28	47.52
KRH44946	Soybean	nucleus	45.54	47.49
Bra028432.1-P	Field mustard	nucleus, plastid	43.56	47.31
CDY37004	Canola	nucleus	43.28	47.08
PGSC0003DMT400076796	Potato	nucleus	45.12	47.05
CDX74463	Canola	nucleus	38.9	44.79
CDX74282	Canola	plastid	39.46	44.78
CDY34698	Canola	plastid	39.46	44.36
CDY55799	Canola	plastid	39.18	44.18
AT3G01085.3	Thale cress	plastid	39.18	43.9
Os01t0925700-01	Rice	cytosol	22.35	42.59
Os11t0242500-01	Rice	mitochondrion	33.1	40.41
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	18.25	40.31
Os08t0112500-01	Rice	nucleus	42.57	40.24
Os12t0577700-00	Rice	plasma membrane	42.01	40.14
Bra041128.1-P	Field mustard	plastid	30.13	39.89
Os02t0304500-00	Rice	plastid	27.58	37.43
Os02t0559300-02	Rice	plasma membrane	38.33	37.17
Os01t0958000-01	Rice	plasma membrane	26.45	36.45
Os05t0389700-01	Rice	nucleus	25.74	35.07
CDX67429	Canola	cytosol, plastid	43.56	33.19
CDX91965	Canola	nucleus	41.02	27.99
Bra001023.1-P	Field mustard	nucleus	41.3	27.44
CDY37546	Canola	nucleus	40.03	27.06
Bra039147.1-P	Field mustard	nucleus	40.03	26.16
CDY43266	Canola	nucleus	37.06	24.55
Os01t0201000-01	Rice	plasma membrane	2.12	11.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EntrezGene:4343794	ProteinID:BAC79804.1	ProteinID:BAF22086.1
ProteinID:BAT02476.1	ProteinID:BAT02477.1	ProteinID:BAT02478.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os07g0596600	EnsemblPlants:Os07t0596600-02	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q7XIB4	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00001B3A37
RefSeq:XP_015647160.1	SEG:seg	:	:	:	:

Description

CDK-LIKE 2, cyclin-dependent kinase-like 2Similar to IBS1 (IMPAIRED IN BABA-INDUCED STERILITY 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase. (Os07t0596600-01);Similar to Cdc2MsC protein. (Os07t0596600-02);Similar to predicted protein. (Os07t0596600-03)

Coordinates

chr7:-:24292810..24298862

Molecular Weight (calculated)

78857.4 Da

IEP (calculated)

10.084

GRAVY (calculated)

-0.634

Length

707 amino acids

Sequence
(BLAST)

001: MGCVASKNAV SVTPAADSSG ALRERSLPRA PEAAATVVSV TASSLRCSSA AAAGRRSEKK RDEAAVAAAG EEPSEKAVIA AATASRSFRL RSLRRSLEGE
101: QVAAGWPPWL SAVAGEAIQG WIPLKADSFE KLEKVGQGTY SSVFRARELD TGKIVALKKV RFDNFEPESV RFMAREIQIL RRLDHPNVMK LEGLITSRLS
201: CSLYLVFEYM EHDLAGLSSS PDIKFSEAQV KCYMNQLLSG LEHCHSRRIV HRDIKGANLL VNNEGVLKIA DFGLANYFDP NKNHPLTSRV VTLWYRPPEL
301: LLGSTHYDAA VDLWSAGCVF AEMFRGKPIL QGRTEVEQLH KIFKLCGSPA DEYWKKSKLP HATIFKPHCP YQSTLQDVFK EMPANALRLL ETLLSVEPYK
401: RGTASAALTS EFFKTKPYAC DPSSLPKYAP NKEMDAKLRE DSHRRKASRG HGPEASRKSR LSRAARETTT VNKQTDGKEE SKTKANGTKD NSILDRTKVN
501: GDARLFSDIQ PVSVAQVKER SRHVKNDSRE EIPFSGPLIV SSSSGFAWAK KPPEDRSFAR SRTKSSSRGQ FTAELDQDNK MPAKENQNLG LKEQPNRDMH
601: IARANSKVRE PHDAAKRAVL KKWSQLGRPD SFDSYDTYHS QNFSNAMYLG DTLSSKNSIK GDHDQGERVE YSGPLLSQSH KVDELLEKHE RHIRQVVRKS
701: WFSRGKK

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.