Factsheet for GSMUA_Achr6P24660_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71137	Canola	plastid	44.02	65.83
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	65.95	64.95
VIT_17s0000g06650.t01	Wine grape	plastid	64.72	61.52
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	65.34	60.94
Solyc03g115660.2.1	Tomato	nucleus	64.26	60.64
GSMUA_Achr4P03350_001	Banana	nucleus	61.96	60.57
PGSC0003DMT400063133	Potato	nucleus	63.8	59.94
KRH63286	Soybean	nucleus	61.04	59.05
TraesCS2A01G182800.1	Wheat	plastid	62.42	58.81
KRH56877	Soybean	nucleus, plastid	60.28	58.66
HORVU2Hr1G034440.3	Barley	plastid	62.42	58.56
Os07t0596600-02	Rice	plasma membrane	63.5	58.56
TraesCS2D01G190600.1	Wheat	plastid	62.12	58.53
KRH54601	Soybean	plastid	60.74	58.32
TraesCS2B01G209300.1	Wheat	plastid	61.5	57.95
KRH03527	Soybean	nucleus, plastid	60.12	57.73
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	58.44	57.38
OQU90194	Sorghum	plastid	61.96	57.06
GSMUA_Achr2P13490_001	Banana	nucleus	56.9	56.99
GSMUA_Achr4P28060_001	Banana	nucleus	57.82	56.02
Zm00001d006759_P012	Maize	plastid	61.81	55.89
CDX83825	Canola	plastid	58.59	54.42
Bra015920.1-P	Field mustard	cytosol	53.22	54.3
CDX73077	Canola	cytosol	53.07	54.15
GSMUA_Achr6P20270_001	Banana	plastid	34.36	53.98
CDX96534	Canola	cytosol	52.76	53.83
CDX81891	Canola	plastid	57.36	53.58
AT1G74330.1	Thale cress	nucleus	57.21	53.36
Zm00001d022041_P001	Maize	plastid	61.2	53.27
KRG93581	Soybean	plastid	47.85	53.24
KRH18441	Soybean	nucleus	47.85	53.15
AT1G18670.3	Thale cress	nucleus	57.52	52.08
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	51.84	51.45
VIT_14s0108g01270.t01	Wine grape	nucleus	55.98	51.26
Bra016547.1-P	Field mustard	nucleus	57.98	50.94
CDX96706	Canola	nucleus	57.82	50.88
PGSC0003DMT400003634	Potato	plastid	51.69	50.83
KRH44946	Soybean	nucleus	51.53	49.56
PGSC0003DMT400076796	Potato	nucleus	51.53	49.56
AT5G39420.1	Thale cress	nucleus	48.77	49.38
KRH01235	Soybean	nucleus, plastid	50.77	49.18
Bra028432.1-P	Field mustard	nucleus, plastid	48.93	49.0
GSMUA_Achr6P07970_001	Banana	plastid	40.49	48.98
CDY37004	Canola	nucleus	48.47	48.62
GSMUA_Achr5P26940_001	Banana	nucleus	42.02	46.28
GSMUA_Achr10P...	Banana	cytosol	35.28	46.28
GSMUA_Achr6P02960_001	Banana	cytosol	25.31	45.96
GSMUA_Achr11P...	Banana	plastid	41.87	45.35
CDX74463	Canola	nucleus	42.64	45.28
CDX74282	Canola	plastid	43.1	45.1
GSMUA_Achr6P07440_001	Banana	cytosol	42.64	44.55
AT3G01085.3	Thale cress	plastid	43.1	44.53
CDY34698	Canola	plastid	42.94	44.52
CDY55799	Canola	plastid	42.79	44.5
GSMUA_Achr11P...	Banana	plastid	41.1	44.37
GSMUA_Achr6P28920_001	Banana	plastid	43.56	42.77
GSMUA_Achr2P02360_001	Banana	plastid	41.26	41.9
GSMUA_Achr8P08480_001	Banana	nucleus	41.41	40.85
Bra041128.1-P	Field mustard	plastid	33.28	40.64
GSMUA_Achr2P05620_001	Banana	cytosol	41.87	40.56
GSMUA_Achr10P...	Banana	nucleus	46.17	40.08
GSMUA_Achr5P16890_001	Banana	nucleus	42.18	39.8
GSMUA_Achr5P05370_001	Banana	nucleus	28.99	36.63
CDX67429	Canola	cytosol, plastid	48.47	34.05
GSMUA_Achr9P08070_001	Banana	nucleus	43.87	30.17
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	31.75	29.91
GSMUA_Achr6P17460_001	Banana	cytosol	43.1	29.86
CDX91965	Canola	nucleus	43.71	27.51
CDY37546	Canola	nucleus	43.56	27.15
Bra001023.1-P	Field mustard	nucleus	43.87	26.88
Bra039147.1-P	Field mustard	nucleus	43.56	26.25
CDY43266	Canola	nucleus	40.64	24.84

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr6G24660_001	EnsemblPlants:GSMUA_Achr6P24660_001	EnsemblPlants:GSMUA_Achr6T24660_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T9W2
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296F352
SEG:seg	:	:	:	:	:

Description

IBS1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G24660_001]

Coordinates

chr6:+:25469456..25477973

Molecular Weight (calculated)

72738.1 Da

IEP (calculated)

8.855

GRAVY (calculated)

-0.556

Length

652 amino acids

Sequence
(BLAST)

001: MGCVASKKTV SVTPALDSSG EEQEGEAAGC TQGDPGKASA ISGSLQSLRL GNFHKYIEGE QVAAGWPAWL SAVAGEAIQG WVPLKADNFE KLEKIGQGTY
101: SSVFRAQDLD TGKVVALKKV RFDNFEPESV RFMAREILIL RRLDHPNVVK LEGLITSRLS CSLYLVFEYM EHDLAGLSAC PDIEFSEAQV KCYMQQLLSG
201: LEHCHLRGVI HRDIKGANLL VNNDGVLKMA DFGLANFCST KHKQPLTSRV VTLWYRPPEL LLGSTNYEVS VDLWSVGCVF AEMFLGKPIL QGRTEVEQLH
301: KIFKLCGSPP DEYWKKSKLP HATIFKPHHP YESCLQDMFK NLPATAINLL ETFLSVEPYK RGTASSALAS EYFRTKPYAC EPSSLPKYPP NKEIDAKSRE
401: ESHRRRIERR RHGPEAITRQ PGAYRASREP SNAPGKIAES QESQINRHGV TRSKVKQEHI RVNGEARLLS QEDAAFSGPL DVSASSGFAW AKRQREACAY
501: DRSHSSSSSK SHVSGAVDPS NTVPDKAVLE LGTHKNGDAD ETSAGSKGHD TYEQAKCKIL KKWATLGRPD SFDSSDIHHS QDFSKVLFRG DPISAKRNFL
601: GRQDEGDRVE FSGPLLSQSH KVDELLQKHE RYIRQAVRRS WFQRVAGRRQ RK

Best Arabidopsis Sequence Match ( AT1G74330.1 )
(BLAST)

001: MGCVSSKQTV SVTPAIDHSG VFKDNENECS GSGRIVVEDP PRPTLKKLVS WRSRSGKRRS QKSGSELGSE SGRASDSLSF RLGNVSRYLE AEQVAAGWPA
101: WLSNVAGEAI HGWVPLRSDA FEKLEKIGQG TYSNVFRAVE TETGRIVALK KVRFDNFEPE SVKFMAREIL ILRRLNHPNI IKLEGLITSK LSCNIQLVFE
201: YMEHDLTGLL SSPDIKFTTP QIKCYMKQLL SGLDHCHSRG VMHRDIKGSN LLLSNEGILK VADFGLANFS NSSGHKKKPL TSRVVTLWYR PPELLLGATD
301: YGASVDLWSV GCVFAELLLG KPILRGRTEV EQLHKIFKLC GSPPEDYWKK SKLPHAMLFK PQQTYDSCLR ETLKDLSETE INLIETLLSI DPHKRGTASS
401: ALVSQYFTTK PFACDPSSLP IYPPSKEIDT KHRDEAARKK ISGNGRRGID PRKPSRKAHS FNRLAPDVRH QTETFQKRIG HLVHSSIESD ARLCGKLQNP
501: LDHKKDEASH VKHASQGDVP FSGPLQVSKS NSFAWAKREK DDVCVRVHNR SLSRGYIPSL SGHSPAFNGK SDVESKINKD EKEDKTDSRG EESYEMVKRS
601: MLKQWRQLER PDSFGASDEY HSQELSLGLY QRDEMAKKMG NNLGDGDKIE FSGPLLSQSY GVDELLERHE RNIRKLIRKP WFQKVQDKQK KILLFSSEL

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.