Factsheet for PGSC0003DMT400003634

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	95.63	96.5
PGSC0003DMT400076796	Potato	nucleus	74.81	73.16
KRG93581	Soybean	plastid	50.38	57.0
KRH18441	Soybean	nucleus	49.47	55.88
PGSC0003DMT400073963	Potato	cytosol	21.42	53.18
PGSC0003DMT400063133	Potato	nucleus	54.9	52.45
GSMUA_Achr6P24660_001	Banana	nucleus	50.83	51.69
VIT_14s0108g01270.t01	Wine grape	nucleus	55.2	51.4
GSMUA_Achr2P13490_001	Banana	nucleus	49.77	50.69
GSMUA_Achr4P28060_001	Banana	nucleus	50.83	50.07
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	49.77	49.85
AT5G39420.1	Thale cress	nucleus	48.42	49.84
KRH01235	Soybean	nucleus, plastid	50.38	49.63
KRH44946	Soybean	nucleus	50.68	49.56
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	49.32	49.25
GSMUA_Achr4P03350_001	Banana	nucleus	49.32	49.03
Bra028432.1-P	Field mustard	nucleus, plastid	48.11	49.0
CDY37004	Canola	nucleus	47.81	48.77
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	50.98	48.35
TraesCS2A01G182800.1	Wheat	plastid	50.38	48.27
TraesCS2D01G190600.1	Wheat	plastid	50.23	48.12
TraesCS2B01G209300.1	Wheat	plastid	50.08	47.98
HORVU2Hr1G034440.3	Barley	plastid	49.92	47.63
OQU90194	Sorghum	plastid	50.23	47.03
Os07t0596600-02	Rice	plasma membrane	49.92	46.82
CDX74463	Canola	nucleus	42.99	46.42
PGSC0003DMT400050723	Potato	cytosol	32.13	46.2
Zm00001d006759_P012	Maize	plastid	50.23	46.19
PGSC0003DMT400057839	Potato	cytosol	39.22	45.14
CDX74282	Canola	plastid	42.38	45.1
CDY55799	Canola	plastid	42.38	44.82
Zm00001d022041_P001	Maize	plastid	50.53	44.73
AT3G01085.3	Thale cress	plastid	42.53	44.69
CDY34698	Canola	plastid	41.93	44.2
PGSC0003DMT400027661	Potato	nucleus	38.61	43.54
PGSC0003DMT400011092	Potato	cytosol	37.1	43.39
PGSC0003DMT400073941	Potato	cytosol	35.29	41.34
Bra041128.1-P	Field mustard	plastid	33.03	41.01
PGSC0003DMT400071458	Potato	nucleus	39.82	40.99
PGSC0003DMT400083223	Potato	cytosol	39.22	40.82
PGSC0003DMT400034197	Potato	nucleus	40.57	39.91
PGSC0003DMT400032406	Potato	nucleus	42.38	38.76
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	33.03	37.82
PGSC0003DMT400047231	Potato	nucleus	40.87	37.8
PGSC0003DMT400040754	Potato	cytosol	30.32	37.36
PGSC0003DMT400064016	Potato	nucleus	39.97	36.35
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	34.99	35.69
CDX67429	Canola	cytosol, plastid	47.96	34.27
PGSC0003DMT400015241	Potato	nucleus	26.09	34.19
CDY37546	Canola	nucleus	43.74	27.72
CDX91965	Canola	nucleus	42.99	27.51
Bra001023.1-P	Field mustard	nucleus	43.59	27.16
Bra039147.1-P	Field mustard	nucleus	43.74	26.8
CDY43266	Canola	nucleus	41.33	25.68
PGSC0003DMT400004748	Potato	nucleus	2.11	9.27

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102600852	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZM17	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400001433	PGSC:PGSC0003DMG400001433
EnsemblPlants:PGSC0003DMT400003634	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF188
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002950C8D
RefSeq:XP_006338417.1	SEG:seg	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001433]

Coordinates

chr2:+:45925023..45931033

Molecular Weight (calculated)

74192.1 Da

IEP (calculated)

9.851

GRAVY (calculated)

-0.614

Length

663 amino acids

Sequence
(BLAST)

001: MGCVSSKQAT SHSPPHDSSV NVASVGNVDP LLHIGFAPLE KIKEEPEKEG EDSVRRFSGK LRASKKGNSD KKAASFSIKF GRLTEGEHLA AGWPVWLTAV
101: AGEAIDGWMP LKSNMFQKLE KIGQGTYSSV YRARDIGNGK MVALKKVRFD NFQPDSVRFM AREIAILRKL DHPNIMKLEG IITSRLSCSI YLVFEYMEHD
201: LSGLLSCPDI KFSDSQIKCY MQQLLRGLEH CHSRGIMHRD IKVSNILVNN EGTLKIADFG LANFLNARHK QPLTSRVVTL WYRPPELLLG STSYGVTVDL
301: WSVGCVFAEL FFGRPLLKGR TEVEQLHKIF KLCGSPPEDY WKRSKLPLAT MFKPKQPYDS TLRDRCKELP KTAVNLIETL ISIDPHKRGT ASSALNSEYF
401: NTKPYACDSS SLPKYPPNKE IDAKFREEAR RKRASSTVQT SETSRNSRKA RKGLQEPSNF CKVVPAEEVE ANVHGSHRNY GSNAHISKGR RATVSRISMK
501: PLYDTVSDAA SQMTDESQGD STVLSVPVQM PESSGFAWAK KGKKGSAATR LYPPPNSRSQ KLSAFDPSGV LHSGDTLESN MQDNDEFLRR THTFQHSIHR
601: KHGHHERQDS FDLSDQELSA DYDGQQGRVG FSGPLLSQSQ TFDPKKDSQA RKAGRRSRFY GDL

Best Arabidopsis Sequence Match ( AT1G18670.3 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKTMMLI TNKKKRMFYD

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.