Factsheet for GSMUA_Achr4P28060_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13490_001	Banana	nucleus	72.07	74.5
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	70.88	71.84
CDY71137	Canola	plastid	42.35	65.37
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	58.99	59.97
GSMUA_Achr6P24660_001	Banana	nucleus	56.02	57.82
VIT_17s0000g06650.t01	Wine grape	plastid	58.54	57.43
GSMUA_Achr4P03350_001	Banana	nucleus	55.72	56.22
Solyc03g115660.2.1	Tomato	nucleus	56.91	55.43
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	57.5	55.36
KRH56877	Soybean	nucleus, plastid	54.83	55.07
KRH54601	Soybean	plastid	55.42	54.93
KRH63286	Soybean	nucleus	54.98	54.9
PGSC0003DMT400063133	Potato	nucleus	56.46	54.76
KRH03527	Soybean	nucleus, plastid	54.83	54.34
GSMUA_Achr6P20270_001	Banana	plastid	31.8	51.57
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	49.93	51.14
KRG93581	Soybean	plastid	44.43	51.02
CDX83825	Canola	plastid	53.05	50.85
PGSC0003DMT400003634	Potato	plastid	50.07	50.83
AT1G74330.1	Thale cress	nucleus	52.75	50.79
CDX96534	Canola	cytosol	48.14	50.7
AT1G18670.3	Thale cress	nucleus	54.23	50.69
KRH18441	Soybean	nucleus	44.13	50.6
CDX81891	Canola	plastid	52.45	50.57
Bra015920.1-P	Field mustard	cytosol	47.99	50.55
CDX73077	Canola	cytosol	47.99	50.55
PGSC0003DMT400076796	Potato	nucleus	48.44	48.08
CDX96706	Canola	nucleus	52.9	48.04
Bra016547.1-P	Field mustard	nucleus	52.45	47.57
VIT_14s0108g01270.t01	Wine grape	nucleus	50.22	47.47
AT5G39420.1	Thale cress	nucleus	44.58	46.58
GSMUA_Achr6P07970_001	Banana	plastid	37.3	46.57
Bra028432.1-P	Field mustard	nucleus, plastid	44.87	46.39
KRH44946	Soybean	nucleus	46.51	46.17
KRH01235	Soybean	nucleus, plastid	46.06	46.06
CDY37004	Canola	nucleus	44.43	46.0
GSMUA_Achr6P02960_001	Banana	cytosol	23.92	44.85
CDX74463	Canola	nucleus	40.71	44.63
CDX74282	Canola	plastid	40.71	43.98
GSMUA_Achr5P26940_001	Banana	nucleus	38.48	43.75
AT3G01085.3	Thale cress	plastid	40.86	43.58
CDY34698	Canola	plastid	40.42	43.24
GSMUA_Achr11P...	Banana	plastid	38.48	43.02
GSMUA_Achr6P07440_001	Banana	cytosol	39.67	42.79
CDY55799	Canola	plastid	39.82	42.74
GSMUA_Achr11P...	Banana	plastid	38.34	42.72
GSMUA_Achr6P28920_001	Banana	plastid	40.42	40.96
GSMUA_Achr10P...	Banana	cytosol	30.01	40.64
GSMUA_Achr8P08480_001	Banana	nucleus	38.19	38.88
GSMUA_Achr5P16890_001	Banana	nucleus	39.82	38.78
GSMUA_Achr5P05370_001	Banana	nucleus	29.57	38.57
GSMUA_Achr2P05620_001	Banana	cytosol	38.34	38.34
GSMUA_Achr2P02360_001	Banana	plastid	36.55	38.32
Bra041128.1-P	Field mustard	plastid	30.31	38.2
GSMUA_Achr10P...	Banana	nucleus	41.9	37.55
CDX67429	Canola	cytosol, plastid	44.73	32.44
GSMUA_Achr9P08070_001	Banana	nucleus	40.71	28.9
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	29.57	28.76
GSMUA_Achr6P17460_001	Banana	cytosol	40.12	28.69
CDX91965	Canola	nucleus	41.31	26.83
Bra001023.1-P	Field mustard	nucleus	41.6	26.32
CDY37546	Canola	nucleus	40.42	26.0
Bra039147.1-P	Field mustard	nucleus	40.42	25.14
CDY43266	Canola	nucleus	37.59	23.71

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G28060_001
EnsemblPlants:GSMUA_Achr4P28060_001	EnsemblPlants:GSMUA_Achr4T28060_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SSR8	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029500CB	SEG:seg

Description

IBS1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G28060_001]

Coordinates

chr4:+:26618285..26622426

Molecular Weight (calculated)

75767.8 Da

IEP (calculated)

9.565

GRAVY (calculated)

-0.621

Length

673 amino acids

Sequence
(BLAST)

001: MGCVASKAPV TPALDSSGAS ADLENSEDES EESKKKSSAG TSSVSFQLRN LNWCTEGEQV AAGWPTWLSA VAGEAIQGWV PLKADSFEKL EKIGQGTYSS
101: VFRARETDTG RIVALKKVRF DNFEPESVRF MAREIQILRK LDHPNIIKLE GIITSRLSCS IYLVFEYMEH DLAGLSSCPD IKFSEPQIKC YMHQLLSGLD
201: QCHSRGIIHR DIKCANLLVN NEGILKMADF GLANILNPEE KQPLTSRVVT LWYRPPELLL GSTDYDASVD LWSVGCVFAE LFLGRPILPG RTEVEQIHKI
301: FKLCGSPPEV YWKQSRMPHA TVFKPQHPYE NCLQETFDTL PESAFELLET FLSIEPKKRG TASAALASKY FRTKPYACDP SSFPKYQPNK EIDAKFREES
401: RRRSVSSRLN VEATGRPSRP YKPSQESNGL ANTASRREGL KIAQGSNRSN VKQEIPRVNN GTRLIIDQQP MPNIRYQDEH RHVKQNYQRV PFSGPLHLSA
501: STSFAGPKKP NELHSHIKPQ ARSRSRHDKS GRLGPSNVSE ITRTFKVNGE ENRDLGHASS SNSKGYKPKD AFQIPRRHPE LQDSTYSFNA YRSRDAVSSK
601: NRSLGYIYQG EKVEFSGPLL LQSKKVDEFL EKHERHIRKA IRKSWFQRVS ADVHLNVVFA TGKKAGTVEI HGG

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.