Factsheet for GSMUA_Achr2P02360_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P20270_001	Banana	plastid	52.96	81.93
GSMUA_Achr11P...	Banana	plastid	76.17	80.96
KRH21021	Soybean	cytosol	61.22	72.78
KRH11268	Soybean	cytosol	60.59	71.9
VIT_05s0020g01890.t01	Wine grape	cytosol	62.62	69.91
KRH02197	Soybean	nucleus	59.35	69.78
KRH50926	Soybean	nucleus	59.5	69.71
GSMUA_Achr5P26940_001	Banana	nucleus	64.17	69.59
GSMUA_Achr11P...	Banana	plastid	63.55	67.77
Os01t0367700-01	Rice	plasma membrane	57.32	65.95
Solyc01g067640.2.1	Tomato	nucleus	59.5	65.86
KXG32500	Sorghum	plastid	57.01	65.71
PGSC0003DMT400027661	Potato	nucleus	59.81	65.31
Zm00001d040829_P003	Maize	plastid	56.54	65.17
GSMUA_Achr6P07970_001	Banana	plastid	50.93	60.67
GSMUA_Achr6P02960_001	Banana	cytosol	28.66	51.25
GSMUA_Achr10P...	Banana	cytosol	37.23	48.09
GSMUA_Achr6P07440_001	Banana	cytosol	46.26	47.6
GSMUA_Achr6P28920_001	Banana	plastid	47.2	45.63
GSMUA_Achr8P08480_001	Banana	nucleus	44.08	42.81
GSMUA_Achr10P...	Banana	nucleus	50.0	42.74
GSMUA_Achr2P05620_001	Banana	cytosol	44.39	42.35
GSMUA_Achr5P16890_001	Banana	nucleus	45.48	42.26
GSMUA_Achr6P24660_001	Banana	nucleus	41.9	41.26
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	42.37	41.09
GSMUA_Achr4P03350_001	Banana	nucleus	40.81	39.28
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	40.65	37.34
GSMUA_Achr2P13490_001	Banana	nucleus	37.85	37.33
GSMUA_Achr5P05370_001	Banana	nucleus	29.91	37.21
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	38.47	37.2
GSMUA_Achr4P28060_001	Banana	nucleus	38.32	36.55
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	37.23	34.54
GSMUA_Achr9P08070_001	Banana	nucleus	47.35	32.07
GSMUA_Achr6P17460_001	Banana	cytosol	46.57	31.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:16.4.1.2.3.2	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr2G02360_001	EnsemblPlants:GSMUA_Achr2P02360_001	EnsemblPlants:GSMUA_Achr2T02360_001	InterPro:IPR000690	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0S4H7	InterPro:Matrin/U1-C_Znf_C2H2	InterPro:Matrin/U1-like-C_Znf_C2H2	PFAM:PF00069	PFAM:PF12874
PFAM:PF16835	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50171	PANTHER:PTHR24056	PANTHER:PTHR24056:SF176
InterPro:Prot_kinase_dom	InterPro:SF3A2_dom	SMART:SM00220	SMART:SM00451	SUPFAM:SSF56112	SUPFAM:SSF57667
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296962A	InterPro:Znf_C2H2_sf	SEG:seg	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr2G02360_001]

Coordinates

chr2:-:8204707..8227832

Molecular Weight (calculated)

71960.1 Da

IEP (calculated)

9.867

GRAVY (calculated)

-0.640

Length

642 amino acids

Sequence
(BLAST)

001: MGCILAKEAS PSPNRSSLGQ RRREKVGTAA PVGSGSKSQA SLSRIETAVD AAPTNTTATV AEVPDRQEDA KRPEGQPPGR RRRQRLEPRL SKPPGHVHGE
101: QVAAGWPSWL SNVAGEAING WTPRRADTFE KIDKASFHLY NVYKARDMLT GKIVALKKVR FDNMEPESVK FMAREILILR RLDHPNVVKL EGLVTSRMSC
201: SLYLVFEYME HDLAGLAASP TIKFTEPQVK CYMRQLLLGL EHCHNNGVLH RDIKGSNLLI DNEGLLKIAD FGLATTFDPD HKQPMTSRVV TLWYRAPELL
301: LGATDYGVGI DLWSAGCILA ELLARKPIMP GRTEVEQLHK IFKLCGSPSE DYWKKSKLPH ATIFKPQQPY KCCIKDTFKD FPPSSMPLVE TLLAIDSAER
401: LTATDALISE FFNTPPYACE PSSLPKYPPS KEMDAKLRDE ETRRLKNGGG KANVNGTKKT RARDRTTRAV PAPEANAELQ VNIDRRRLIT HANAKSKSEK
501: FPPPHQDGSL GYPLESSHYM DPAFDPPEAS FSTCKLCLTL HNNEGNYLAH TQGKRHQTNL AKRAAREAKD APAQPQPHKR KVSLRKSVKI GRPGYRVTKQ
601: FDPETKQRSL LFQIEYPEIE DNSKPRHRFM SSFEQASATQ YQ

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.