Factsheet for GSMUA_Achr3P30270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	80.21	75.97
GSMUA_Achr4P03350_001	Banana	nucleus	71.3	70.76
GSMUA_Achr6P24660_001	Banana	nucleus	64.95	65.95
CDY71137	Canola	plastid	41.69	63.3
TraesCS2D01G190600.1	Wheat	plastid	64.5	61.71
TraesCS2A01G182800.1	Wheat	plastid	64.5	61.71
TraesCS2B01G209300.1	Wheat	plastid	64.2	61.42
HORVU2Hr1G034440.3	Barley	plastid	63.6	60.58
Os07t0596600-02	Rice	plasma membrane	64.2	60.11
OQU90194	Sorghum	plastid	63.9	59.75
GSMUA_Achr2P13490_001	Banana	nucleus	58.31	59.29
VIT_17s0000g06650.t01	Wine grape	plastid	61.33	59.18
GSMUA_Achr4P28060_001	Banana	nucleus	59.97	58.99
Solyc03g115660.2.1	Tomato	nucleus	61.33	58.76
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	58.91	58.73
KRH63286	Soybean	nucleus	59.37	58.31
PGSC0003DMT400063133	Potato	nucleus	61.03	58.21
KRH54601	Soybean	plastid	59.67	58.17
Zm00001d006759_P012	Maize	plastid	63.14	57.98
KRH56877	Soybean	nucleus, plastid	58.46	57.76
KRH03527	Soybean	nucleus, plastid	58.76	57.29
Zm00001d022041_P001	Maize	plastid	62.69	55.41
GSMUA_Achr6P20270_001	Banana	plastid	33.53	53.49
CDX73077	Canola	cytosol	50.3	52.11
Bra015920.1-P	Field mustard	cytosol	50.3	52.11
AT1G74330.1	Thale cress	nucleus	54.38	51.5
CDX96534	Canola	cytosol	49.7	51.49
CDX83825	Canola	plastid	54.53	51.42
CDX81891	Canola	plastid	53.93	51.15
KRG93581	Soybean	plastid	45.17	51.02
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	50.6	50.99
KRH18441	Soybean	nucleus	45.17	50.94
AT1G18670.3	Thale cress	nucleus	55.14	50.69
GSMUA_Achr6P07970_001	Banana	plastid	40.63	49.91
PGSC0003DMT400003634	Potato	plastid	49.85	49.77
VIT_14s0108g01270.t01	Wine grape	nucleus	53.47	49.72
GSMUA_Achr6P02960_001	Banana	cytosol	26.59	49.03
PGSC0003DMT400076796	Potato	nucleus	49.4	48.23
CDX96706	Canola	nucleus	53.93	48.18
Bra016547.1-P	Field mustard	nucleus	53.78	47.98
Bra028432.1-P	Field mustard	nucleus, plastid	46.98	47.77
CDY37004	Canola	nucleus	46.53	47.38
AT5G39420.1	Thale cress	nucleus	45.92	47.2
KRH44946	Soybean	nucleus	47.73	46.61
KRH01235	Soybean	nucleus, plastid	47.28	46.51
GSMUA_Achr5P26940_001	Banana	nucleus	41.54	46.45
GSMUA_Achr6P07440_001	Banana	cytosol	43.5	46.15
GSMUA_Achr11P...	Banana	plastid	41.69	45.7
GSMUA_Achr11P...	Banana	plastid	40.79	44.85
CDX74282	Canola	plastid	41.84	44.46
GSMUA_Achr10P...	Banana	cytosol	33.08	44.06
AT3G01085.3	Thale cress	plastid	41.99	44.06
CDY34698	Canola	plastid	41.84	44.04
CDY55799	Canola	plastid	41.54	43.86
CDX74463	Canola	nucleus	40.63	43.81
GSMUA_Achr6P28920_001	Banana	plastid	42.9	42.77
GSMUA_Achr2P02360_001	Banana	plastid	41.09	42.37
GSMUA_Achr5P16890_001	Banana	nucleus	42.75	40.96
GSMUA_Achr2P05620_001	Banana	cytosol	41.39	40.71
GSMUA_Achr8P08480_001	Banana	nucleus	40.63	40.7
Bra041128.1-P	Field mustard	plastid	32.48	40.26
GSMUA_Achr10P...	Banana	nucleus	44.86	39.55
GSMUA_Achr5P05370_001	Banana	nucleus	29.15	37.4
CDX67429	Canola	cytosol, plastid	46.68	33.3
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	33.08	31.65
GSMUA_Achr9P08070_001	Banana	nucleus	43.96	30.7
GSMUA_Achr6P17460_001	Banana	cytosol	42.75	30.07
CDY37546	Canola	nucleus	42.75	27.06
CDX91965	Canola	nucleus	42.3	27.03
Bra001023.1-P	Field mustard	nucleus	42.75	26.6
Bra039147.1-P	Field mustard	nucleus	42.75	26.16
CDY43266	Canola	nucleus	39.73	24.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G30270_001
EnsemblPlants:GSMUA_Achr3P30270_001	EnsemblPlants:GSMUA_Achr3T30270_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SJ41	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002965669	SEG:seg

Description

IBS1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G30270_001]

Coordinates

chr3:-:29086116..29093508

Molecular Weight (calculated)

74268.9 Da

IEP (calculated)

8.691

GRAVY (calculated)

-0.534

Length

662 amino acids

Sequence
(BLAST)

001: MGCVASKNVV SVTPAVDSSG ILRDHRERSG PISTSSQRAG CTTSQSFRLE NLNKYIEGEQ VAAGWPSWLS AVAGDAIQGW VPLKADSFEK LEKIGQGTYS
101: SVFRARDLDT GKIVALKKVR FDNFERESVR FMAREIKILR WLDHPNIIKL EGLITSRLSC SLYLVFEYME HDLAGLSSSP NIKFSESQVK CYMQQLLSGL
201: EHCHSRGIIH RDIKGANLLV NNEGVVKIAD FGLANFFSPG HSQPLTSRVV TLWYRPPELL LGSTNYGTTV DLWSIGCVFA EMFVGRPILQ GRTEVEQLHK
301: IFKLCGSPPD EYWNKSKLPH ATIFRPYHLY ESSLLETFKS LPESAISLLE TFLSIEPFKR GTATSALEVE YFKTKPYACE PSSLPKYPPT KEIDTKSRDE
401: TRRRRVTGRG QGSEATKRTS RTHRSSWASS GLSKIADSKE ESEISAGNVK KDLPRVDSET RLFVDLQPMP SVKCPEEGHR AKCNSQEELA FPGPLLVSAS
501: SGFAWAGQRV GDAYGRSDSR SSSKSHFSCE RNSSNIENIK SKLDYKGQEN VDLHVGSKGH VPYELAKCAM LNRWTQLDHP ESFDSSDAYY SQEMSEALCK
601: GDPSSMRHNN LGYHDQDRVE FSGPLLSQSC KVDELLQKHE RHIRQAVRRS WFQKVAGRKQ GK

Best Arabidopsis Sequence Match ( AT1G74330.1 )
(BLAST)

001: MGCVSSKQTV SVTPAIDHSG VFKDNENECS GSGRIVVEDP PRPTLKKLVS WRSRSGKRRS QKSGSELGSE SGRASDSLSF RLGNVSRYLE AEQVAAGWPA
101: WLSNVAGEAI HGWVPLRSDA FEKLEKIGQG TYSNVFRAVE TETGRIVALK KVRFDNFEPE SVKFMAREIL ILRRLNHPNI IKLEGLITSK LSCNIQLVFE
201: YMEHDLTGLL SSPDIKFTTP QIKCYMKQLL SGLDHCHSRG VMHRDIKGSN LLLSNEGILK VADFGLANFS NSSGHKKKPL TSRVVTLWYR PPELLLGATD
301: YGASVDLWSV GCVFAELLLG KPILRGRTEV EQLHKIFKLC GSPPEDYWKK SKLPHAMLFK PQQTYDSCLR ETLKDLSETE INLIETLLSI DPHKRGTASS
401: ALVSQYFTTK PFACDPSSLP IYPPSKEIDT KHRDEAARKK ISGNGRRGID PRKPSRKAHS FNRLAPDVRH QTETFQKRIG HLVHSSIESD ARLCGKLQNP
501: LDHKKDEASH VKHASQGDVP FSGPLQVSKS NSFAWAKREK DDVCVRVHNR SLSRGYIPSL SGHSPAFNGK SDVESKINKD EKEDKTDSRG EESYEMVKRS
601: MLKQWRQLER PDSFGASDEY HSQELSLGLY QRDEMAKKMG NNLGDGDKIE FSGPLLSQSY GVDELLERHE RNIRKLIRKP WFQKVQDKQK KILLFSSEL

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.