CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 4
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44946	Soybean	nucleus	91.23	90.56
KRG93581	Soybean	plastid	59.44	68.26
KRH18441	Soybean	nucleus	58.69	67.29
GSMUA_Achr6P24660_001	Banana	nucleus	49.18	50.77
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	49.33	50.53
PGSC0003DMT400003634	Potato	plastid	49.63	50.38
AT5G39420.1	Thale cress	nucleus	47.4	49.53
GSMUA_Achr2P13490_001	Banana	nucleus	47.55	49.16
KRH56877	Soybean	nucleus, plastid	48.74	48.96
KRH63286	Soybean	nucleus	48.59	48.52
Bra028432.1-P	Field mustard	nucleus, plastid	46.81	48.39
CDY37004	Canola	nucleus	46.66	48.31
KRH54601	Soybean	plastid	48.74	48.31
KRH03527	Soybean	nucleus, plastid	48.74	48.31
PGSC0003DMT400076796	Potato	nucleus	48.29	47.94
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	46.51	47.28
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	45.91	46.54
VIT_14s0108g01270.t01	Wine grape	nucleus	49.18	46.49
HORVU2Hr1G034440.3	Barley	plastid	47.85	46.33
TraesCS2A01G182800.1	Wheat	plastid	47.55	46.24
TraesCS2D01G190600.1	Wheat	plastid	47.55	46.24
TraesCS2B01G209300.1	Wheat	plastid	47.4	46.1
GSMUA_Achr4P28060_001	Banana	nucleus	46.06	46.06
CDX74463	Canola	nucleus	41.9	45.93
Os07t0596600-02	Rice	plasma membrane	48.14	45.83
KRH50926	Soybean	nucleus	37.3	45.8
AT3G01085.3	Thale cress	plastid	42.94	45.8
KRH21021	Soybean	cytosol	36.7	45.74
GSMUA_Achr4P03350_001	Banana	nucleus	45.32	45.73
CDX74282	Canola	plastid	42.05	45.43
KRH02197	Soybean	nucleus	36.85	45.42
KRH11268	Soybean	cytosol	36.4	45.29
OQU90194	Sorghum	plastid	47.55	45.2
CDY55799	Canola	plastid	42.05	45.14
CDY34698	Canola	plastid	41.9	44.83
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	46.36	44.64
KRH41090	Soybean	cytosol	36.7	44.5
KRG96918	Soybean	cytosol	37.74	44.41
KRH59775	Soybean	nucleus	36.55	44.32
KRH54127	Soybean	mitochondrion	36.7	44.19
KRH63826	Soybean	cytosol	23.92	44.11
Zm00001d006759_P012	Maize	plastid	46.81	43.69
KRH68662	Soybean	nucleus	37.74	42.91
KRH34013	Soybean	nucleus	36.85	42.76
KRG92786	Soybean	nucleus	36.85	42.76
Zm00001d022041_P001	Maize	plastid	46.21	41.52
KRH53817	Soybean	nucleus	30.31	41.46
Bra041128.1-P	Field mustard	plastid	32.39	40.82
KRH59494	Soybean	nucleus	24.81	40.05
KRH64126	Soybean	nucleus	29.72	40.0
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	27.49	39.11
KRH06043	Soybean	nucleus	33.73	39.07
KRH27243	Soybean	nucleus	39.97	37.99
KRH27807	Soybean	nucleus	34.92	37.72
KRH26282	Soybean	nucleus	39.52	37.52
KRH55283	Soybean	nucleus	39.52	37.46
KRH77684	Soybean	nucleus	35.22	37.38
KRH22087	Soybean	nucleus	39.23	37.08
KRH26151	Soybean	nucleus	39.23	36.11
KRG89779	Soybean	nucleus	27.49	35.58
KRH73489	Soybean	nucleus	27.04	35.27
KRH25594	Soybean	nucleus	36.26	35.11
KRH55951	Soybean	nucleus	36.26	35.06
KRH14656	Soybean	nucleus	26.75	34.88
KRH35103	Soybean	nucleus	30.91	34.49
KRH26956	Soybean	nucleus	35.66	34.48
KRH22379	Soybean	nucleus	35.96	34.42
CDX67429	Canola	cytosol, plastid	46.66	33.84
CDY37546	Canola	nucleus	43.39	27.92
CDX91965	Canola	nucleus	42.64	27.7
Bra001023.1-P	Field mustard	nucleus	43.24	27.35
Bra039147.1-P	Field mustard	nucleus	43.39	26.99
CDY43266	Canola	nucleus	40.12	25.3

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100796152	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EMBL:ACUP02011508	EnsemblPlantsGene:GLYMA_18G263300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	UniProt:K7MUW2	EnsemblPlants:KRH01235
ProteinID:KRH01235	ProteinID:KRH01235.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233F103	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:-:54866367..54872231

Molecular Weight (calculated)

75229.6 Da

IEP (calculated)

9.866

GRAVY (calculated)

-0.600

Length

673 amino acids

Sequence
(BLAST)

001: MGCASSKKTV AGAGDSTPEG PCVVPSSSRR RSNNGLGRNQ NGVVGEAREG EAREEWSKGS LREGNGSVSL RLSCRFVEAE QNAAGWPPWL TSVAGEAIQG
101: WVPLKTDSFE RLDKIGQGTY SSVFQAREVK TGRMVALKKV HFDKFQAESI RFMAREILIL RTLDHPNIMK LEGIITSKLS NSIYLVFEYM EHDLAGLVAS
201: PDIKFTDSQI KCYMRQLLSG IEHCHLKGIM HRDIKVSNIL VNNEGVLKIA DFGLANTLVP NSKQPLTSRV VTLWYRPPEN LLGSTNYGVS VDLWSVGCVF
301: AELFLGKPIL KGRTEVEQLH KIFKLCGSPP EEFWKKNKLP LATMFKPRTN YKTSLKERCR GFPATAVNLL ETLLSIDPSK RGTASSALMS EYFSTKPYAC
401: NPSLLPKYPP SKEMDAKNWE DVRRKKNGGK VREAVTSKRQ RQVHKVSHDH INFNKPALKE EMQNDSQNAA PDDGRAHVTK GKVAGAMHKE QPKPSYDAKS
501: EAAQVVNGCN GYSVYSGPSP VSGSSGFTWA KRRKPKASSI LSNGSIRKVS ALDPTFAKGT YVLTEHGIEV SERKHSYNTN HQDVTSNYVS KKYLAPRVQQ
601: KSFDVADTYN SNYYMDFDFT DKMDALIDTQ GHRKHGEPVE PKIIPSDKND EMLHWNEHSM RQCLRKSRFG RDQ

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.