CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54610.1	KRG89812	AT2G41090.1	17360592
AT1G54610.1	KRG94975	AT2G41090.1	17360592
AT1G54610.1	KRH18664	AT2G41090.1	17360592
AT1G54610.1	KRG89812	AT2G41100.1	17360592
AT1G54610.1	KRG94975	AT2G41100.1	17360592
AT1G54610.1	KRH18664	AT2G41100.1	17360592
AT1G54610.1	KRH31638	AT4G14640.1	17360592
AT1G54610.1	KRH69070	AT4G14640.1	17360592
AT1G54610.1	KRG89812	AT5G21274.1	17360592
AT1G54610.1	KRG94975	AT5G21274.1	17360592
AT1G54610.1	KRH18664	AT5G21274.1	17360592
AT3G05050.1	KRH31638	AT4G14640.1	17360592
AT3G05050.1	KRH69070	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96918	Soybean	cytosol	90.88	94.06
Os07t0668000-00	Rice	cytosol, plasma membrane	4.56	87.1
KRH34013	Soybean	nucleus	83.11	84.83
KRG92786	Soybean	nucleus	80.74	82.41
KRH21021	Soybean	cytosol	69.26	75.93
KRH11268	Soybean	cytosol	68.58	75.05
KRH02197	Soybean	nucleus	67.74	73.44
PGSC0003DMT400057839	Potato	cytosol	71.45	73.44
Solyc01g098160.2.1	Tomato	nucleus	71.28	73.39
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	71.96	73.2
KRH50926	Soybean	nucleus	67.74	73.18
TraesCS2D01G120200.1	Wheat	nucleus	56.76	70.59
Bra027966.1-P	Field mustard	nucleus	66.55	69.98
CDY67158	Canola	plastid	66.72	69.79
CDX95237	Canola	nucleus	67.06	69.53
Zm00001d047482_P001	Maize	nucleus	64.36	69.53
AT1G54610.1	Thale cress	nucleus	66.72	69.06
OQU92600	Sorghum	nucleus	64.86	68.09
Zm00001d029143_P003	Maize	nucleus	62.5	67.64
TraesCS4B01G151800.1	Wheat	nucleus	62.16	67.15
Zm00001d022499_P001	Maize	plastid	64.19	66.55
TraesCS4A01G142300.1	Wheat	nucleus	61.99	66.25
TraesCS4D01G151100.1	Wheat	nucleus	61.99	66.25
TraesCS2A01G119300.1	Wheat	nucleus	63.18	66.08
Zm00001d007111_P001	Maize	plastid	63.85	65.97
TraesCS2B01G139000.1	Wheat	nucleus	63.34	65.67
KXG36890	Sorghum	plastid	63.18	65.38
KRH63826	Soybean	cytosol	39.19	63.56
KRH54127	Soybean	mitochondrion	59.12	62.61
KRH59775	Soybean	nucleus	56.93	60.72
HORVU4Hr1G048510.1	Barley	cytosol	56.42	60.29
KRH41090	Soybean	cytosol	55.74	59.46
HORVU2Hr1G020680.2	Barley	cytosol	48.82	58.86
AT3G05050.1	Thale cress	nucleus, plastid	58.45	58.35
Bra040637.1-P	Field mustard	plastid	56.76	58.13
CDY18783	Canola	plastid	56.76	58.13
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	55.41	58.05
CDX86178	Canola	cytosol, nucleus, plastid	55.41	58.05
CDY53230	Canola	nucleus, plastid	57.09	57.88
CDX80672	Canola	cytosol, plastid	55.57	57.52
CDY41930	Canola	cytosol	56.42	56.9
Bra039466.1-P	Field mustard	plastid	55.57	56.43
CDY27801	Canola	cytosol	55.57	56.43
KRH27243	Soybean	nucleus	55.57	46.47
KRH22087	Soybean	nucleus	55.57	46.21
KRH55283	Soybean	nucleus	55.24	46.06
KRH27807	Soybean	nucleus	47.47	45.1
KRH06043	Soybean	nucleus	44.26	45.09
KRH53817	Soybean	nucleus	37.16	44.72
KRH77684	Soybean	nucleus	47.3	44.16
KRH26151	Soybean	nucleus	54.39	44.05
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	35.14	43.97
KRH59494	Soybean	nucleus	30.74	43.65
KRH64126	Soybean	nucleus	36.82	43.6
KRG93581	Soybean	plastid	42.57	43.0
KRH18441	Soybean	nucleus	42.4	42.76
KRH56877	Soybean	nucleus, plastid	48.14	42.54
KRH63286	Soybean	nucleus	48.31	42.43
KRH26282	Soybean	nucleus	50.51	42.17
KRH03527	Soybean	nucleus, plastid	47.97	41.83
KRH54601	Soybean	plastid	47.97	41.83
KRH26956	Soybean	nucleus	48.14	40.95
KRH55951	Soybean	nucleus	47.64	40.52
KRH25594	Soybean	nucleus	46.96	40.0
KRH22379	Soybean	nucleus	47.47	39.97
KRH35103	Soybean	nucleus	39.36	38.64
KRH14656	Soybean	nucleus	33.45	38.37
KRH73489	Soybean	nucleus	33.45	38.37
KRG89779	Soybean	nucleus	33.45	38.08
KRH44946	Soybean	nucleus	43.41	37.91
KRH01235	Soybean	nucleus, plastid	42.91	37.74

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100786837	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EMBL:ACUP02002121	EnsemblPlantsGene:GLYMA_03G243500
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	UniProt:K7KGT3	EnsemblPlants:KRH68662
ProteinID:KRH68662	ProteinID:KRH68662.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF176	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002948E9E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:44117143..44121525

Molecular Weight (calculated)

65787.0 Da

IEP (calculated)

10.042

GRAVY (calculated)

-0.597

Length

592 amino acids

Sequence
(BLAST)

001: MGCVISREVS KGIISEVKEE KGLSGESKRK VGGVSGSKGE VVEVQNGEKE KGGEGVQRSC GERRRSKANP RLSNPPKHLR GEQVAAGWPP WLTAVCGEAL
101: SGWIPRKADT FEKIDKIGQG TYSNVYKAKD MMTGKIVALK KVRFDNLEPE SVKFMAREIL ILRRLDHPNV VKLQGLVTSR MSCSLYLVFD YMEHDLAGLA
201: ASPGIRFTEP QVKCYMHQLL SGLEHCHNRH VLHRDIKGSN LLIDNEGTLK IADFGLASIF DPNHKHPMTS RVVTLWYRPP ELLLGATDYS VGVDLWSAGC
301: ILGELLAGKP IMPGRTEVEQ LHKIYKLCGS PSDEYWKKSK LPNATSFKPR DPYKRHIRET FKDFPPSALP LIDTLLAIDP VERKTASDAL RSEFFTTEPY
401: ACDPSSLPKY PPSKEMDAKR RDDEMRRLFN KVTLPTKHTN TIIHKTVRAA GKAQADGPKK HRTRNRAAKA FPAPEANAEL QSNIDRRRLI THANAKSKSE
501: KFPPPHQDGQ VGFPLGSSHH IDPDTVPTDV SFTSTSYTYS KEPFQAWSGP IGNAADIGVP KRKKHTAADA LDLSKPQKDA LKDKVKGKKS IA

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.