Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G151100.1 | Wheat | nucleus | 99.27 | 98.19 |
| TraesCS4A01G142300.1 | Wheat | nucleus | 97.81 | 96.75 |
| Zm00001d047482_P001 | Maize | nucleus | 87.59 | 87.59 |
| Zm00001d029143_P003 | Maize | nucleus | 86.5 | 86.65 |
| OQU92600 | Sorghum | nucleus | 88.69 | 86.17 |
| HORVU4Hr1G048510.1 | Barley | cytosol | 81.93 | 81.05 |
| TraesCS2B01G139000.1 | Wheat | nucleus | 83.03 | 79.68 |
| Solyc01g098160.2.1 | Tomato | nucleus | 68.98 | 65.74 |
| PGSC0003DMT400057839 | Potato | cytosol | 68.98 | 65.62 |
| KRG96918 | Soybean | cytosol | 67.15 | 64.34 |
| VIT_14s0030g01260.t01 | Wine grape | cytosol, nucleus, plastid | 66.97 | 63.06 |
| KRH34013 | Soybean | nucleus | 66.61 | 62.93 |
| Bra027966.1-P | Field mustard | nucleus | 64.23 | 62.52 |
| CDY67158 | Canola | plastid | 64.42 | 62.37 |
| CDX95237 | Canola | nucleus | 64.78 | 62.17 |
| KRH68662 | Soybean | nucleus | 67.15 | 62.16 |
| AT1G54610.1 | Thale cress | nucleus | 64.78 | 62.06 |
| KRG92786 | Soybean | nucleus | 65.15 | 61.55 |
| CDX86178 | Canola | cytosol, nucleus, plastid | 56.39 | 54.69 |
| Bra009977.1-P | Field mustard | cytosol, nucleus, plastid | 56.39 | 54.69 |
| Bra040637.1-P | Field mustard | plastid | 57.48 | 54.5 |
| CDY18783 | Canola | plastid | 57.48 | 54.5 |
| CDX80672 | Canola | cytosol, plastid | 56.57 | 54.2 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 58.58 | 54.13 |
| CDY53230 | Canola | nucleus, plastid | 57.12 | 53.6 |
| Bra039466.1-P | Field mustard | plastid | 55.66 | 52.32 |
| CDY27801 | Canola | cytosol | 55.66 | 52.32 |
| CDY41930 | Canola | cytosol | 55.84 | 52.13 |
| TraesCS3B01G158600.1 | Wheat | cytosol | 59.67 | 47.74 |
| TraesCS3B01G473100.1 | Wheat | cytosol, plasma membrane, plastid | 46.53 | 45.7 |
| TraesCS2B01G209300.1 | Wheat | plastid | 52.19 | 41.33 |
| TraesCS7B01G220500.1 | Wheat | nucleus | 55.66 | 41.05 |
| TraesCS6B01G231200.2 | Wheat | cytosol | 51.64 | 40.6 |
| TraesCS7B01G345800.1 | Wheat | nucleus | 40.69 | 39.19 |
| TraesCS5B01G081500.1 | Wheat | nucleus | 46.72 | 37.81 |
| TraesCS1B01G254800.1 | Wheat | nucleus | 34.85 | 37.38 |
| TraesCS3B01G561200.1 | Wheat | nucleus | 34.31 | 37.08 |
| TraesCS4B01G089100.3 | Wheat | mitochondrion | 46.35 | 36.87 |
| TraesCS5B01G110400.1 | Wheat | nucleus | 20.99 | 35.83 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 |
| PANTHER:PTHR24056:SF176 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS4B01G151800 | EnsemblPlants:TraesCS4B01G151800.1 | TIGR:cd07840 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4B:-:246315212..246319666
Molecular Weight (calculated)
60701.2 Da
IEP (calculated)
10.093
GRAVY (calculated)
-0.627
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVHGRPSA VPTPDRPPPE PKPEQAPPQE GDKFPATAEK PARKERRSRS SRSVAEARLG GSFANRARGE QVAAGWPAWL SAVAGEAIDG WTPRRADSFE
101: KIDKIGQGTY SNVYKARDTV SGKIVALKKV RFDNLEPESV RFMAREILIL RRLDHPSVIK IDGLVTSRMS CSLYLVFEYM EHDLAGLVAS PDIKFTEPQV
201: KCYMNQLLSG LEHCHDRGVL HRDIKGSNLL LDNNGMLKIA DFGLASFFDP SRKQPMTSRV VTLWYRPPEL LLGATDYGVG VDLWSAGCIL AELLAGRPIM
301: PGRTEVEQLH KIFKLCGSPT EEYWKKSKLP HATIFKPQQP YKRRITDTFK DFPQSALRLI ETLLAIDPAD RLTASSALRS DFFTTEPYAC EPSSLPKYPP
401: SKEMDAKRRD EEARRSRAAG GRPNGDGASK ARTRDRPRGA PAPEANAELQ VNIDKRRIVS HANAKSKSEK FPPPHQDGAV GFPLGSSNQM DPLYEPPDPT
501: SFSTVFSHEK SSVPTWSGPL VNSSAVGNQK RKHKSSRSSK QPSTARAR
101: KIDKIGQGTY SNVYKARDTV SGKIVALKKV RFDNLEPESV RFMAREILIL RRLDHPSVIK IDGLVTSRMS CSLYLVFEYM EHDLAGLVAS PDIKFTEPQV
201: KCYMNQLLSG LEHCHDRGVL HRDIKGSNLL LDNNGMLKIA DFGLASFFDP SRKQPMTSRV VTLWYRPPEL LLGATDYGVG VDLWSAGCIL AELLAGRPIM
301: PGRTEVEQLH KIFKLCGSPT EEYWKKSKLP HATIFKPQQP YKRRITDTFK DFPQSALRLI ETLLAIDPAD RLTASSALRS DFFTTEPYAC EPSSLPKYPP
401: SKEMDAKRRD EEARRSRAAG GRPNGDGASK ARTRDRPRGA PAPEANAELQ VNIDKRRIVS HANAKSKSEK FPPPHQDGAV GFPLGSSNQM DPLYEPPDPT
501: SFSTVFSHEK SSVPTWSGPL VNSSAVGNQK RKHKSSRSSK QPSTARAR
001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
Arabidopsis Description
Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.