Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g098160.2.1 | Tomato | nucleus | 97.57 | 97.74 |
| Os07t0668000-00 | Rice | cytosol, plasma membrane | 4.69 | 87.1 |
| KRH34013 | Soybean | nucleus | 73.61 | 73.1 |
| KRG96918 | Soybean | cytosol | 72.4 | 72.9 |
| TraesCS2D01G120200.1 | Wheat | nucleus | 60.07 | 72.69 |
| KRH68662 | Soybean | nucleus | 73.44 | 71.45 |
| KRG92786 | Soybean | nucleus | 71.88 | 71.38 |
| Zm00001d047482_P001 | Maize | nucleus | 67.53 | 70.99 |
| VIT_14s0030g01260.t01 | Wine grape | cytosol, nucleus, plastid | 71.7 | 70.96 |
| CDX95237 | Canola | nucleus | 69.27 | 69.88 |
| Bra027966.1-P | Field mustard | nucleus | 68.23 | 69.8 |
| PGSC0003DMT400027661 | Potato | nucleus | 71.01 | 69.56 |
| CDY67158 | Canola | plastid | 68.23 | 69.43 |
| OQU92600 | Sorghum | nucleus | 67.88 | 69.33 |
| Zm00001d029143_P003 | Maize | nucleus | 65.62 | 69.1 |
| TraesCS4B01G151800.1 | Wheat | nucleus | 65.62 | 68.98 |
| TraesCS2A01G119300.1 | Wheat | nucleus | 67.36 | 68.55 |
| TraesCS4D01G151100.1 | Wheat | nucleus | 65.62 | 68.23 |
| TraesCS4A01G142300.1 | Wheat | nucleus | 65.45 | 68.05 |
| KXG36890 | Sorghum | plastid | 67.53 | 68.01 |
| TraesCS2B01G139000.1 | Wheat | nucleus | 67.36 | 67.95 |
| AT1G54610.1 | Thale cress | nucleus | 67.36 | 67.83 |
| Zm00001d007111_P001 | Maize | plastid | 67.36 | 67.71 |
| Zm00001d022499_P001 | Maize | plastid | 67.01 | 67.6 |
| HORVU4Hr1G048510.1 | Barley | cytosol | 58.68 | 61.01 |
| HORVU2Hr1G020680.2 | Barley | cytosol | 51.74 | 60.69 |
| PGSC0003DMT400011092 | Potato | cytosol | 58.68 | 59.61 |
| CDX86178 | Canola | cytosol, nucleus, plastid | 58.33 | 59.47 |
| Bra009977.1-P | Field mustard | cytosol, nucleus, plastid | 58.33 | 59.47 |
| CDX80672 | Canola | cytosol, plastid | 58.68 | 59.09 |
| CDY18783 | Canola | plastid | 59.03 | 58.82 |
| Bra040637.1-P | Field mustard | plastid | 59.03 | 58.82 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 59.9 | 58.18 |
| CDY53230 | Canola | nucleus, plastid | 58.85 | 58.05 |
| PGSC0003DMT400073963 | Potato | cytosol | 26.74 | 57.68 |
| CDY41930 | Canola | cytosol | 57.81 | 56.73 |
| CDY27801 | Canola | cytosol | 57.29 | 56.6 |
| Bra039466.1-P | Field mustard | plastid | 57.29 | 56.6 |
| PGSC0003DMT400073941 | Potato | cytosol | 47.05 | 47.88 |
| PGSC0003DMT400050723 | Potato | cytosol | 37.15 | 46.42 |
| PGSC0003DMT400071458 | Potato | nucleus | 51.56 | 46.12 |
| PGSC0003DMT400083223 | Potato | cytosol | 49.48 | 44.74 |
| PGSC0003DMT400032406 | Potato | nucleus | 55.9 | 44.41 |
| PGSC0003DMT400047231 | Potato | nucleus | 53.65 | 43.1 |
| PGSC0003DMT400034197 | Potato | nucleus | 49.83 | 42.58 |
| PGSC0003DMT400064016 | Potato | nucleus | 52.26 | 41.29 |
| PGSC0003DMT400040754 | Potato | cytosol | 37.85 | 40.52 |
| PGSC0003DMT400064516 | Potato | mitochondrion, nucleus | 40.28 | 40.07 |
| PGSC0003DMT400073927 | Potato | cytosol, nucleus, peroxisome | 44.97 | 39.85 |
| PGSC0003DMT400003634 | Potato | plastid | 45.14 | 39.22 |
| PGSC0003DMT400076796 | Potato | nucleus | 45.83 | 38.94 |
| PGSC0003DMT400015241 | Potato | nucleus | 34.03 | 38.74 |
| PGSC0003DMT400063133 | Potato | nucleus | 46.53 | 38.62 |
| PGSC0003DMT400004748 | Potato | nucleus | 3.3 | 12.58 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:102581857 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M1C1R9 | PFAM:PF00069 | EnsemblPlantsGene:PGSC0003DMG400022457 | PGSC:PGSC0003DMG400022457 |
| EnsemblPlants:PGSC0003DMT400057839 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF319 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00029622DE |
| RefSeq:XP_006347832.1 | RefSeq:XP_006347833.1 | SEG:seg | : | : | : |
Description
Serine/threonine-protein kinase cdk9 [Source:PGSC_GENE;Acc:PGSC0003DMG400022457]
Coordinates
chr1:-:75782518..75791381
Molecular Weight (calculated)
64478.7 Da
IEP (calculated)
9.460
GRAVY (calculated)
-0.713
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVLGREVS SGLVHNGREE KREGGVHYEK KSQSISAELT ETLEVKGAEN VTVHTEVVEA DEGDETKKDD KAEHDGKSRK EKRRSKPDPR LSNPPKHKHG
101: EQVAAGWPSW LSAHVGEAID GWLPRRADTF EKIDKIGQGT YSNVYKARDT VTGKIVALKK VRFDNLEPES VRFMAREIII LRQLDHPNVI KLEGLVTSRM
201: SCSLYLVFEY MDHDLAGLAA SPDIKFTEAQ VKCYMHQLLS GLEHCHNRHV LHRDIKGSNL LLDNSGILRI ADFGLATIFD PRHKHQMTSR VVTLWYRPPE
301: LLLGATDYGV GIDLWSAGCI LAELLAGKPI MPGRTEVEQL HKIYKLCGSP SEEYWKKSKL PNATLFKPRE PYRRCIRETY KDFPQSSLPL IDTLLAIDPA
401: ERKTATDALR SEFFNTEPYA CDPSSLPKYP PTKEMDAKRR DDEARRLRAA NKAPGDGAKR ARHRERTRAG PAPDANAENQ ANIDRRRLIT HANAKSKSEK
501: FPPPHQDGGL GVPLGASHHI DPSLVPPDVP FSSTSFTYSK EPVQNWSGPL VEPASAGGRR KKHTAGDAKK HLSKKR
101: EQVAAGWPSW LSAHVGEAID GWLPRRADTF EKIDKIGQGT YSNVYKARDT VTGKIVALKK VRFDNLEPES VRFMAREIII LRQLDHPNVI KLEGLVTSRM
201: SCSLYLVFEY MDHDLAGLAA SPDIKFTEAQ VKCYMHQLLS GLEHCHNRHV LHRDIKGSNL LLDNSGILRI ADFGLATIFD PRHKHQMTSR VVTLWYRPPE
301: LLLGATDYGV GIDLWSAGCI LAELLAGKPI MPGRTEVEQL HKIYKLCGSP SEEYWKKSKL PNATLFKPRE PYRRCIRETY KDFPQSSLPL IDTLLAIDPA
401: ERKTATDALR SEFFNTEPYA CDPSSLPKYP PTKEMDAKRR DDEARRLRAA NKAPGDGAKR ARHRERTRAG PAPDANAENQ ANIDRRRLIT HANAKSKSEK
501: FPPPHQDGGL GVPLGASHHI DPSLVPPDVP FSSTSFTYSK EPVQNWSGPL VEPASAGGRR KKHTAGDAKK HLSKKR
001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
Arabidopsis Description
Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.