CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54610.1	EES01631	AT2G41090.1	17360592
AT1G54610.1	EES09201	AT2G41090.1	17360592
AT1G54610.1	EES16322	AT2G41090.1	17360592
AT1G54610.1	OQU78227	AT2G41090.1	17360592
AT1G54610.1	EES01631	AT2G41100.1	17360592
AT1G54610.1	EES09201	AT2G41100.1	17360592
AT1G54610.1	EES16322	AT2G41100.1	17360592
AT1G54610.1	OQU78227	AT2G41100.1	17360592
AT1G54610.1	KXG37587	AT4G14640.1	17360592
AT1G54610.1	KXG37588	AT4G14640.1	17360592
AT1G54610.1	EES01631	AT5G21274.1	17360592
AT1G54610.1	EES09201	AT5G21274.1	17360592
AT1G54610.1	EES16322	AT5G21274.1	17360592
AT1G54610.1	OQU78227	AT5G21274.1	17360592
AT3G05050.1	KXG37587	AT4G14640.1	17360592
AT3G05050.1	KXG37588	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007111_P001	Maize	plastid	96.5	96.34
Os07t0668000-00	Rice	cytosol, plasma membrane	5.07	93.55
TraesCS2A01G119300.1	Wheat	nucleus	87.76	88.69
TraesCS2B01G139000.1	Wheat	nucleus	88.11	88.27
TraesCS2D01G120200.1	Wheat	nucleus	73.25	88.03
OQU92600	Sorghum	nucleus	82.17	83.33
HORVU2Hr1G020680.2	Barley	cytosol	64.16	74.75
KXG32500	Sorghum	plastid	68.18	70.02
Solyc01g098160.2.1	Tomato	nucleus	68.01	67.65
PGSC0003DMT400057839	Potato	cytosol	68.01	67.53
KRG96918	Soybean	cytosol	65.21	65.21
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	66.08	64.95
Bra027966.1-P	Field mustard	nucleus	63.64	64.65
CDY67158	Canola	plastid	63.81	64.49
KRH34013	Soybean	nucleus	65.38	64.48
CDX95237	Canola	nucleus	63.81	63.92
KRH68662	Soybean	nucleus	65.38	63.18
KRG92786	Soybean	nucleus	63.99	63.1
AT1G54610.1	Thale cress	nucleus	62.94	62.94
CDX86178	Canola	cytosol, nucleus, plastid	55.42	56.11
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	55.42	56.11
CDX80672	Canola	cytosol, plastid	55.77	55.77
CDY18783	Canola	plastid	56.12	55.54
Bra040637.1-P	Field mustard	plastid	56.12	55.54
AT3G05050.1	Thale cress	nucleus, plastid	57.52	55.48
CDY53230	Canola	nucleus, plastid	55.94	54.79
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	43.01	54.79
CDY41930	Canola	cytosol	55.07	53.66
Bra039466.1-P	Field mustard	plastid	54.55	53.52
CDY27801	Canola	cytosol	54.55	53.52
EES04133	Sorghum	cytosol, plasma membrane, plastid	45.98	47.22
EES02288	Sorghum	cytosol	56.82	46.97
EES15089	Sorghum	cytosol	25.0	44.27
EES15821	Sorghum	mitochondrion	49.13	43.5
KXG24243	Sorghum	nucleus	54.72	41.57
EES05258	Sorghum	nucleus	50.35	41.44
OQU90194	Sorghum	plastid	48.95	39.55
KXG23797	Sorghum	plastid	45.63	37.13
EER93534	Sorghum	cytosol	33.22	37.11
EES18167	Sorghum	nucleus	32.34	35.85
EER88844	Sorghum	vacuole	34.44	34.68
OQU76929	Sorghum	nucleus	39.69	31.1

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	UniProt:A0A1B6QG67	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	EnsemblPlants:KXG36890	ProteinID:KXG36890	ProteinID:KXG36890.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF219	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G408800	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00081AD578
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:75760984..75765627

Molecular Weight (calculated)

62763.5 Da

IEP (calculated)

10.068

GRAVY (calculated)

-0.544

Length

572 amino acids

Sequence
(BLAST)

001: MGCVHGRPTT SSPAPAATSS RRRDHPTVTQ PQQEGVDSSD AATAAAAAAP EQQAAEKPEK VKRERRSRSS RSAAAAAAHA EVRLGGSFAN KARGEQVAAG
101: WPAWLSAVAG EAIDGWTPRR ADSFEKIDKI GQGTYSNVYK ARDSISGKIV ALKKVRFDNL EPESVRFMAR EILILRRLDH PNVIKLDGLV TSRMSCSLYL
201: VFDYMVHDLA GLAASPDIKF TLPQVKCYVH QLLSGLEHCH NRGVLHRDIK GSNLLLDNNG VLKIGDFGLA SFFDPNHKQP MTSRVVTLWY RPPELLLGAT
301: DYGVGIDLWS AGCILAELLA GKPIMPGRTE VEQLHKIFKL CGSPTEEYWK KSKLPHATIF KPQQPYKRRI ADTFKDFPQT AIRLIETLLA IDPADRLTAT
401: SALNSDFFAT EPYACEPSSL PQYPPSKEMD AKRRDEEARR LRAAGGRANG DGTRKTRTRD RPRAVPAPEA NAELQANIDK RRLITHANAK SKSEKFPPPH
501: QDGALGFPLG CSNHMEPSFE PPDPSSFSTV FPFDKSTVPT WSGPLADSAA GNQKRKHKSG RSSKQPATAR AR

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.