CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88427
EER92766
EER92767
EER94870
EER98873
EES03295
EES04113
EES07541
EES10011
EES10606
EES11021
EES15016
KXG21829
KXG22639
KXG29406
KXG29961
KXG30261
KXG32406
KXG38359
OQU89756

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10270.1	EES11021	AT1G13450.1	12678503
AT5G10270.1	EES07541	AT1G27630.1	12678503
AT5G10270.1	KXG29406	AT1G27630.1	12678503
AT5G10270.1	EER92766	AT3G15000.1	12678503
AT5G10270.1	EER92767	AT3G15000.1	12678503
AT5G10270.1	OQU89756	AT3G15000.1	12678503
AT5G10270.1	EER98873	AT3G17860.1	21798944
AT5G10270.1	EES15016	AT3G17860.1	21798944
AT5G10270.1	KXG38359	AT4G14300.1	12678503
AT5G64960.1	EER94870	AT1G02840.1	18208522
AT5G64960.1	KXG21829	AT1G02840.1	18208522
AT5G64960.1	KXG32406	AT1G02840.1	18208522
AT5G64960.1	EES07541	AT1G27630.1	12678503
AT5G64960.1	KXG29406	AT1G27630.1	12678503
AT5G64960.1	EES04113	AT2G43710.1	20706207
AT5G64960.1	EES10606	AT2G43710.1	20706207
AT5G64960.1	KXG30261	AT2G43710.1	20706207
AT5G64960.1	EER92766	AT3G15000.1	12678503
AT5G64960.1	EER92767	AT3G15000.1	12678503
AT5G64960.1	OQU89756	AT3G15000.1	12678503
AT5G64960.1	EES10011	AT3G55760.1	20706207
AT5G64960.1	EER88427	AT4G01090.1	21798944
AT5G64960.1	EES03295	AT4G01090.1	21798944
AT5G64960.1	KXG22639	AT4G01090.1	21798944
AT5G64960.1	KXG29961	AT4G01090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032078_P002	Maize	cytosol	97.52	97.52
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	78.33	79.06
VIT_07s0141g00280.t01	Wine grape	cytosol	46.75	60.89
CDY72385	Canola	cytosol	27.55	52.98
Bra024341.1-P	Field mustard	cytosol	55.42	44.97
CDY08835	Canola	cytosol	55.11	41.59
AT5G10270.1	Thale cress	nucleus	60.99	39.01
AT5G64960.1	Thale cress	nucleus	60.37	38.01
Bra009045.1-P	Field mustard	nucleus	59.44	37.72
CDX69849	Canola	nucleus	59.44	37.72
CDY33994	Canola	nucleus	60.37	37.72
Bra031892.1-P	Field mustard	nucleus	60.37	37.64
CDX96988	Canola	nucleus	59.13	37.52
CDY31293	Canola	nucleus	60.06	37.45
CDY56227	Canola	nucleus	59.13	37.45
Bra028333.1-P	Field mustard	nucleus	58.82	37.4
Solyc04g056280.2.1	Tomato	nucleus	58.82	37.11
EES18167	Sorghum	nucleus	58.82	36.82
EER93534	Sorghum	cytosol	58.2	36.72
CDY18101	Canola	cytosol	49.23	34.49
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	41.8	30.07
KXG32500	Sorghum	plastid	44.58	25.85
OQU92600	Sorghum	nucleus	44.89	25.71
CDY14526	Canola	cytosol	56.35	25.35
KXG36890	Sorghum	plastid	44.27	25.0
EES04133	Sorghum	cytosol, plasma membrane, plastid	41.8	24.24
EES15821	Sorghum	mitochondrion	41.49	20.74
EES02288	Sorghum	cytosol	42.41	19.8
EES05258	Sorghum	nucleus	41.8	19.42
EER88844	Sorghum	vacuole	34.06	19.37
KXG23797	Sorghum	plastid	41.49	19.06
OQU90194	Sorghum	plastid	41.49	18.93
KXG24243	Sorghum	nucleus	43.96	18.86
OQU76929	Sorghum	nucleus	38.7	17.12

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	EntrezGene:8077891
UniProt:C5YLT5	EnsemblPlants:EES15089	ProteinID:EES15089	ProteinID:EES15089.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468
GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF211	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	EnsemblPlantsGene:SORBI_3007G148400	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A87C09	RefSeq:XP_002445594.1

Description

hypothetical protein

Coordinates

chr7:-:57927492..57934912

Molecular Weight (calculated)

36302.2 Da

IEP (calculated)

7.935

GRAVY (calculated)

-0.203

Length

323 amino acids

Sequence
(BLAST)

001: MDGEEAPLGA LNLAEYAPAG ARTVDCYRRI RKIGEGTYGE VFEAVDIITG ERAALKKIKL DDGKEGFPRQ ILREIKLLKK LDHENIIRLK EIVVSPGSAH
101: GTGGSDDHIY RGDIYMVFEY MDHDLKKVLH HSAPSQVKVY MGQLLKGLQY CHVNNVLHRD IKGANLLITG GKLLKLADFG LARLFTRDGT LTNHVITLWY
201: RPPELLLGAT SYAEPVDIWS VGCIFAEFLL KKPLFPGRSE QEQLLKIFEL CGSPNEENWP GVSKLPLYKT MTIRPATPTK RSLRDMLQNF DCHAVELIER
301: MLILNPSQRI SAQDALAAAY FNN

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.