CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033847_P003	Maize	nucleus	96.68	97.06
Os01t0958000-01	Rice	plasma membrane	93.95	93.76
Zm00001d013371_P001	Maize	nucleus	96.09	93.18
TraesCS3A01G498200.1	Wheat	nucleus	89.84	90.73
TraesCSU01G058100.1	Wheat	nucleus	89.65	90.53
TraesCS3B01G561200.1	Wheat	nucleus	89.26	90.14
GSMUA_Achr5P05370_001	Banana	nucleus	87.89	87.21
EES18167	Sorghum	nucleus	84.18	83.53
HORVU3Hr1G110150.3	Barley	plastid	90.23	83.24
PGSC0003DMT400015241	Potato	nucleus	80.47	81.42
Solyc06g073630.2.1	Tomato	nucleus	80.08	81.03
KRG89779	Soybean	nucleus	82.23	80.96
KRH73489	Soybean	nucleus	81.45	80.81
KRH14656	Soybean	nucleus	81.45	80.81
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	56.05	61.72
EES15089	Sorghum	cytosol	36.72	58.2
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	34.18	38.98
KXG32500	Sorghum	plastid	39.84	36.62
OQU92600	Sorghum	nucleus	39.06	35.46
KXG36890	Sorghum	plastid	37.11	33.22
EES04133	Sorghum	cytosol, plasma membrane, plastid	34.57	31.78
EES15821	Sorghum	mitochondrion	37.7	29.88
EES02288	Sorghum	cytosol	40.04	29.62
EES05258	Sorghum	nucleus	38.67	28.49
OQU90194	Sorghum	plastid	37.3	26.98
KXG24243	Sorghum	nucleus	38.28	26.03
KXG23797	Sorghum	plastid	35.16	25.6
EER88844	Sorghum	vacuole	28.32	25.53
OQU76929	Sorghum	nucleus	31.64	22.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	UniProt:C5WM29
ncoils:Coil	EnsemblPlants:EER93534	ProteinID:EER93534	ProteinID:EER93534.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3001G107500	SUPFAM:SSF56112	unigene:Sbi.1901	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A827D1	RefSeq:XP_002466536.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:8331250..8334555

Molecular Weight (calculated)

56614.4 Da

IEP (calculated)

9.661

GRAVY (calculated)

-0.796

Length

512 amino acids

Sequence
(BLAST)

001: MAVAAPGQLN LDEAPSWGSR SVDCFEKLEQ IGEGTYGQVY MAKETGTNEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIKLKEI VTSPGPERDE
101: QGKPIDGNKY KGSIYMVFEY MDHDLTGLAD RPGMRFTVPQ IKCYMRQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNGNLTNR
201: VITLWYRPPE LLLGSTKYGP AVDMWSVGCI FAELLNGKPI LPGKNEPEQL TKIFELCGTP DDQIWPGVTK MPWYNNFKPP RQLKRRVKEF FKHFDRHALE
301: LLEKMLTLDP LQRISAKDAL DAEYFWTDPL PCDPKSLPKY EASHEFQTKK KRQQQRQAEE AAKRQKLNHP PPHSRLPPIQ QPGQAHPQIR PGMHNVPPVA
401: AGPGHHYAKP RGPGGPSRYP QGGNQGGGYN PNRGGQGGGY GSGPYPQQGR GPPYPGGGMG GAAGPRGSGA SGYGASGPNY QQGGPYGASG PGRGPNYAQG
501: GSRNQQQYGN WQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.