CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54610.1	EES01631	AT2G41090.1	17360592
AT1G54610.1	EES09201	AT2G41090.1	17360592
AT1G54610.1	EES16322	AT2G41090.1	17360592
AT1G54610.1	OQU78227	AT2G41090.1	17360592
AT1G54610.1	EES01631	AT2G41100.1	17360592
AT1G54610.1	EES09201	AT2G41100.1	17360592
AT1G54610.1	EES16322	AT2G41100.1	17360592
AT1G54610.1	OQU78227	AT2G41100.1	17360592
AT1G54610.1	KXG37587	AT4G14640.1	17360592
AT1G54610.1	KXG37588	AT4G14640.1	17360592
AT1G54610.1	EES01631	AT5G21274.1	17360592
AT1G54610.1	EES09201	AT5G21274.1	17360592
AT1G54610.1	EES16322	AT5G21274.1	17360592
AT1G54610.1	OQU78227	AT5G21274.1	17360592
AT3G05050.1	KXG37587	AT4G14640.1	17360592
AT3G05050.1	KXG37588	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047482_P001	Maize	nucleus	93.62	96.35
Zm00001d029143_P003	Maize	nucleus	92.02	94.88
TraesCS4B01G151800.1	Wheat	nucleus	86.17	88.69
TraesCS4D01G151100.1	Wheat	nucleus	86.35	87.91
TraesCS4A01G142300.1	Wheat	nucleus	85.11	86.64
KXG36890	Sorghum	plastid	83.33	82.17
HORVU4Hr1G048510.1	Barley	cytosol	72.69	74.01
KXG32500	Sorghum	plastid	69.68	70.56
Solyc01g098160.2.1	Tomato	nucleus	69.5	68.17
PGSC0003DMT400057839	Potato	cytosol	69.33	67.88
KRG96918	Soybean	cytosol	67.73	66.78
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	67.2	65.12
KRH68662	Soybean	nucleus	68.09	64.86
Bra027966.1-P	Field mustard	nucleus	64.54	64.65
CDY67158	Canola	plastid	64.72	64.49
KRH34013	Soybean	nucleus	66.31	64.48
AT1G54610.1	Thale cress	nucleus	65.07	64.16
CDX95237	Canola	nucleus	64.72	63.92
KRG92786	Soybean	nucleus	65.25	63.45
AT3G05050.1	Thale cress	nucleus, plastid	58.87	55.99
CDX86178	Canola	cytosol, nucleus, plastid	56.03	55.93
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	56.03	55.93
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	44.33	55.68
Bra040637.1-P	Field mustard	plastid	56.91	55.54
CDY18783	Canola	plastid	56.91	55.54
CDX80672	Canola	cytosol, plastid	56.21	55.42
CDY53230	Canola	nucleus, plastid	56.74	54.79
Bra039466.1-P	Field mustard	plastid	55.85	54.03
CDY27801	Canola	cytosol	55.85	54.03
CDY41930	Canola	cytosol	56.03	53.83
EES02288	Sorghum	cytosol	58.69	47.83
EES04133	Sorghum	cytosol, plasma membrane, plastid	46.28	46.86
EES15089	Sorghum	cytosol	25.71	44.89
EES15821	Sorghum	mitochondrion	49.65	43.34
EES05258	Sorghum	nucleus	52.13	42.3
KXG24243	Sorghum	nucleus	55.32	41.43
OQU90194	Sorghum	plastid	49.82	39.69
EER93534	Sorghum	cytosol	35.46	39.06
KXG23797	Sorghum	plastid	47.34	37.98
EES18167	Sorghum	nucleus	34.4	37.6
EER88844	Sorghum	vacuole	34.75	34.51
OQU76929	Sorghum	nucleus	40.43	31.23

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	UniProt:A0A1Z5S9I1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU92600	ProteinID:OQU92600	ProteinID:OQU92600.1	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF176	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G372900	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B8B9D06
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:66086712..66091655

Molecular Weight (calculated)

62113.2 Da

IEP (calculated)

9.663

GRAVY (calculated)

-0.540

Length

564 amino acids

Sequence
(BLAST)

001: MGCVHGRPSA PSPDHPPEPP APAAAVVQEA AGNKAEQSAA PAEKPARRER RSRSSRSGPG PGPSFANRAR GEQVAAGWPA WLSAVAGEAI DGWTPRRADS
101: FEKIDKLCLR LCGGCCAAGQ IGQGTYSNVY KARDTVSGKI VALKKVRFDN LEPESVRFMA REILILRRLD HPNVVKLDGL VTSRMSCSLY LVFEYMEHDL
201: AGLAASPEIK FTEPQVKCYM HQLLSGLEHC HDRGVLHRDI KGSNLLLDNN GMLKIADFGL ASFFDPDRKQ PMTSRVVTLW YRPPELLLGA TDYEVGVDLW
301: SAGCILAELL AGRPIMPGRT EVEQLHKIFK LCGSPTEEYW KKSKLPHATI FKPQQPYKRR IRETFKDFPQ SALQLIETLL AIDPADRLTA TSALRSDFFT
401: TEPLACEPSS LPKYPPSKEI DAKRRDEEAR RLRAAGGRAN GDGAKKTRTR DRPKAVPAPE ANAELQVNID KRRFITHANA KSKSEKFPPP HQDGAVGVPL
501: DTSNHMDPLY EPPDPSSFST VFTYEKGGVP TWSGPLVDPA AVVNQKRKHK SGRSSKQPAT ARAR

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.