CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	100.0	100.0
CDX80672	Canola	cytosol, plastid	96.81	95.63
CDY18783	Canola	plastid	74.51	72.84
CDY53230	Canola	nucleus, plastid	74.51	72.09
CDY27801	Canola	cytosol	72.39	70.15
CDY41930	Canola	cytosol	72.57	69.85
Os07t0668000-00	Rice	cytosol, plasma membrane	3.72	67.74
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	29.2	59.78
TraesCS2D01G120200.1	Wheat	nucleus	49.91	59.24
PGSC0003DMT400057839	Potato	cytosol	59.47	58.33
Solyc01g098160.2.1	Tomato	nucleus	58.76	57.74
KRH34013	Soybean	nucleus	59.12	57.59
KRG96918	Soybean	cytosol	57.88	57.17
KRG92786	Soybean	nucleus	58.58	57.07
CDY67158	Canola	plastid	56.99	56.89
Zm00001d047482_P001	Maize	nucleus	55.04	56.75
CDX95237	Canola	nucleus	56.99	56.39
TraesCS4B01G151800.1	Wheat	nucleus	54.69	56.39
OQU92600	Sorghum	nucleus	55.93	56.03
Zm00001d029143_P003	Maize	nucleus	53.98	55.76
TraesCS2A01G119300.1	Wheat	nucleus	55.75	55.65
TraesCS4D01G151100.1	Wheat	nucleus	54.51	55.6
KXG36890	Sorghum	plastid	56.11	55.42
KRH68662	Soybean	nucleus	58.05	55.41
Zm00001d007111_P001	Maize	plastid	56.11	55.32
TraesCS4A01G142300.1	Wheat	nucleus	54.16	55.23
Zm00001d022499_P001	Maize	plastid	55.75	55.17
TraesCS2B01G139000.1	Wheat	nucleus	55.58	54.99
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	55.22	53.61
CDY71137	Canola	plastid	39.29	50.92
HORVU4Hr1G048510.1	Barley	cytosol	48.85	49.82
CDY54916	Canola	mitochondrion	28.67	49.09
HORVU2Hr1G020680.2	Barley	cytosol	42.65	49.08
CDY45813	Canola	cytosol	48.5	47.82
CDY05828	Canola	cytosol	49.03	47.68
CDX71637	Canola	cytosol	48.32	47.07
CDX84882	Canola	cytosol	48.67	46.22
CDY72385	Canola	cytosol	13.63	45.83
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	41.42	44.4
CDY48795	Canola	nucleus	39.29	43.27
CDY25738	Canola	nucleus, plastid	48.14	41.27
CDY02525	Canola	plastid	48.14	41.21
CDX99520	Canola	nucleus	44.25	40.72
CDY58380	Canola	nucleus	41.95	40.44
CDX68307	Canola	plastid	43.89	40.19
CDX86879	Canola	nucleus	43.89	40.19
CDY36688	Canola	plastid	43.72	40.03
CDX96330	Canola	plastid	44.78	39.78
CDY15287	Canola	nucleus	43.36	39.64
CDY03697	Canola	nucleus, plastid	45.49	39.6
CDY10826	Canola	nucleus	37.35	39.51
CDX72813	Canola	plastid	44.42	39.47
CDX93753	Canola	nucleus	43.54	39.42
CDY25881	Canola	plastid	47.43	39.3
CDY67268	Canola	nucleus, plastid	45.13	39.23
CDY70545	Canola	nucleus	43.36	39.14
CDY70577	Canola	nucleus	43.36	39.14
CDY31076	Canola	nucleus	43.72	39.08
CDY50511	Canola	nucleus, plastid	47.43	38.78
CDY13111	Canola	nucleus	41.95	38.6
CDY14916	Canola	nucleus	42.3	38.49
CDY66485	Canola	nucleus	42.3	38.36
CDY60604	Canola	nucleus	42.83	38.05
CDY20686	Canola	nucleus	44.07	37.9
CDY33146	Canola	nucleus	42.65	37.72
CDY20858	Canola	nucleus	42.65	37.72
CDY53144	Canola	nucleus	44.6	37.56
CDY39924	Canola	nucleus	43.89	37.41
CDY29169	Canola	nucleus	43.89	37.41
CDY08835	Canola	cytosol	28.32	37.38
CDY31800	Canola	nucleus	44.78	37.26
CDX93496	Canola	nucleus	44.25	37.04
CDX73077	Canola	cytosol	41.42	36.62
CDY56227	Canola	nucleus	32.92	36.47
CDX96534	Canola	cytosol	41.24	36.46
CDX74282	Canola	plastid	39.47	35.79
CDY33994	Canola	nucleus	32.74	35.78
CDY34698	Canola	plastid	39.82	35.77
CDX96988	Canola	nucleus	32.21	35.76
CDY55799	Canola	plastid	39.65	35.73
CDY31293	Canola	nucleus	32.74	35.71
CDX69849	Canola	nucleus	32.04	35.56
CDX89871	Canola	mitochondrion, nucleus	45.13	35.27
CDY37004	Canola	nucleus	40.53	35.23
CDX81891	Canola	plastid	43.36	35.1
CDY18101	Canola	cytosol	28.5	34.92
CDY41270	Canola	cytosol	33.98	34.1
CDX83825	Canola	plastid	42.3	34.05
CDY18179	Canola	nucleus	44.42	33.78
CDX96706	Canola	nucleus	42.83	32.66
CDX74463	Canola	nucleus	35.22	32.41
CDY06363	Canola	mitochondrion	43.36	29.34
CDY22631	Canola	mitochondrion	43.01	29.17
CDY50891	Canola	nucleus, plastid	44.42	26.23
CDX67429	Canola	cytosol, plastid	40.18	24.46
CDY14526	Canola	cytosol	30.44	23.96
CDX91965	Canola	nucleus	40.35	22.01
CDY37546	Canola	nucleus	40.35	21.8
CDY43266	Canola	nucleus	37.52	19.87

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:A0A078DFU4	EnsemblPlants:CDX86178	ProteinID:CDX86178
ProteinID:CDX86178.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00144244001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000253F51B	SEG:seg	:	:	:	:

Description

BnaA06g28950D

Coordinates

chrLK031845:-:199502..202471

Molecular Weight (calculated)

64087.2 Da

IEP (calculated)

9.819

GRAVY (calculated)

-0.564

Length

565 amino acids

Sequence
(BLAST)

001: MGCVLGRPVS SSDSVSGSIH QVSTRYERKE VKETVTEAET ISSIVVPVAR VDEIKEENEK LTGESKRSNK ADPRKSNPPK HLIGEQISAG WPSWLSEICG
101: EALNGWLPRK ADSFEKIEKI GSGTYSNVYK AKDLLTGNIV ALKKVRCDVR EKESLRFMAR EILILRRLDH PNVIKLEGLV TSRMSSSLYL VFRYMHHDLA
201: GLVASPDIKF TKQQVKCYMK QLLSGLEHCH SRGVLHRDIK GSNLLIDDEG VLKIGDFGLA TFFDPRRRQQ MTNRVVTLWY RAPELLHGVV EYGFGIDLWS
301: AGCILGELLT GRPIMPGRTE VEQLHRIYKL CGSPSEEYWR KIKLPSTRKH AQHRPLPQYK RRIREVYKDF SPEAVSLMDT LLALDPAERK TATSASMSDF
401: FTTYPLPCQP FDLPKYPPTK EIDAKRRDEE YRRLREKRKN AHESGRRKTK PRERAVRAMP VPEANAEVQS NIDRMRMITH ANAKSKSDKF PPPHQDGLLG
501: FPMGLSRRFE PSEIPFSSTS FTSYANEPLE MWSGPLAPVE FTDIAAETRR SGGCGGGSMR MDVKV

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.