CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	78.79	49.34
CDY13111	Canola	nucleus	80.61	43.32
CDY14916	Canola	nucleus	81.52	43.32
CDY66485	Canola	nucleus	81.21	43.02
CDY60604	Canola	nucleus	80.3	41.67
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	34.85	41.67
CDY20858	Canola	nucleus	80.3	41.47
CDY33146	Canola	nucleus	80.3	41.47
AT5G44290.3	Thale cress	nucleus	79.39	40.68
CDY71137	Canola	plastid	46.06	34.86
CDY10826	Canola	nucleus	50.91	31.46
CDX89871	Canola	mitochondrion, nucleus	68.18	31.12
CDY67158	Canola	plastid	52.73	30.74
CDY18179	Canola	nucleus	68.48	30.42
CDX95237	Canola	nucleus	52.12	30.12
CDY45813	Canola	cytosol	51.82	29.84
CDX71637	Canola	cytosol	51.82	29.48
CDY05828	Canola	cytosol	51.82	29.43
CDX84882	Canola	cytosol	51.82	28.74
CDX86178	Canola	cytosol, nucleus, plastid	49.09	28.67
CDY02525	Canola	plastid	56.97	28.48
CDY48795	Canola	nucleus	44.24	28.46
CDX80672	Canola	cytosol, plastid	49.09	28.32
CDY27801	Canola	cytosol	50.0	28.3
CDY41930	Canola	cytosol	50.3	28.28
CDY25738	Canola	nucleus, plastid	56.06	28.07
CDY18783	Canola	plastid	49.09	28.03
CDY58380	Canola	nucleus	49.7	27.99
CDY53230	Canola	nucleus, plastid	48.79	27.57
CDY25881	Canola	plastid	56.97	27.57
CDX86879	Canola	nucleus	51.52	27.55
CDY72385	Canola	cytosol	13.94	27.38
KRH25594	Soybean	nucleus	57.58	27.34
Solyc10g008280.2.1	Tomato	nucleus	56.06	27.21
CDX99520	Canola	nucleus	50.61	27.2
KRH55951	Soybean	nucleus	56.97	27.01
PGSC0003DMT400034197	Potato	nucleus	55.15	27.0
Solyc07g053910.2.1	Tomato	nucleus, plastid	58.48	26.96
PGSC0003DMT400047231	Potato	nucleus	58.48	26.92
CDY50511	Canola	nucleus, plastid	56.36	26.92
CDY31076	Canola	nucleus	50.61	26.42
CDY29169	Canola	nucleus	53.03	26.4
KRH26956	Soybean	nucleus	55.45	26.29
CDX68307	Canola	plastid	49.09	26.26
CDY39924	Canola	nucleus	52.73	26.24
KRH22379	Soybean	nucleus	55.76	26.17
CDY41270	Canola	cytosol	44.55	26.11
CDY36688	Canola	plastid	48.79	26.09
CDY15287	Canola	nucleus	48.48	25.89
CDY70577	Canola	nucleus	49.09	25.88
CDX93753	Canola	nucleus	48.79	25.8
CDY53144	Canola	nucleus	52.42	25.78
CDY70545	Canola	nucleus	48.79	25.72
CDY31800	Canola	nucleus	52.73	25.63
CDX93496	Canola	nucleus	52.12	25.48
CDX96330	Canola	plastid	49.09	25.47
CDX96534	Canola	cytosol	49.09	25.35
CDX73077	Canola	cytosol	49.09	25.35
CDX96988	Canola	nucleus	39.09	25.34
CDX69849	Canola	nucleus	38.79	25.15
CDY20686	Canola	nucleus	50.0	25.11
CDX72813	Canola	plastid	48.18	25.0
CDY08835	Canola	cytosol	32.12	24.77
CDY03697	Canola	nucleus, plastid	48.48	24.65
CDY67268	Canola	nucleus, plastid	48.18	24.46
CDY33994	Canola	nucleus	38.18	24.37
CDY56227	Canola	nucleus	37.58	24.31
CDY31293	Canola	nucleus	37.88	24.13
CDY18101	Canola	cytosol	33.64	24.08
CDX81891	Canola	plastid	48.18	22.78
CDX83825	Canola	plastid	47.88	22.51
CDY37004	Canola	nucleus	44.24	22.46
CDY34698	Canola	plastid	42.73	22.42
CDX74282	Canola	plastid	42.12	22.31
CDY55799	Canola	plastid	42.12	22.17
CDX96706	Canola	nucleus	48.48	21.59
CDY22631	Canola	mitochondrion	51.82	20.53
CDX74463	Canola	nucleus	38.18	20.52
CDY06363	Canola	mitochondrion	51.52	20.36
CDY50891	Canola	nucleus, plastid	51.52	17.76
CDX67429	Canola	cytosol, plastid	44.55	15.84
CDY14526	Canola	cytosol	33.64	15.46
CDY37546	Canola	nucleus	42.42	13.38
CDX91965	Canola	nucleus	41.52	13.22
CDY43266	Canola	nucleus	38.48	11.9

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:A0A078IZK2	UniProt:A0A078IZK2	EnsemblPlants:CDY54916	ProteinID:CDY54916
ProteinID:CDY54916.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00014815001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF326	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDD3AC	:	:

Description

BnaC07g17100DBnaC07g17100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZK2]

Coordinates

chrLK033360:+:19261..20886

Molecular Weight (calculated)

36929.4 Da

IEP (calculated)

9.592

GRAVY (calculated)

-0.370

Length

330 amino acids

Sequence
(BLAST)

001: MFKWPAWQVS VAGEALVGWT PRRAISFEKL DKIGQGTYSS LVIFSTTTRS LHLKRVRFDL TDLESVKYMD HDLLGLASIP GIKFSQPQVK CYMKQLLSGL
101: HHCHSRGVLH RDLKGSNLLI DSNGVLKIAD FGLATFFDPR NSVPLTSRVV TLWYRPPELL LGACHYGVGV DLWSAGCILG ELYSGKPILP GKTELHITIL
201: NPSRNSTSSI ALESEYFSTE PFACDPSSLP KYSPIKEIDA KLRDEAKRQQ RRPQEKQDSL TRRSHERKLI PPVKANPSLA AATENPYLRR CVPGHSTRQM
301: QITKDMTSNN ATSGRVSYSG PIDEKQECSF

Best Arabidopsis Sequence Match ( AT5G44290.1 )
(BLAST)

001: MGCIISKKKS PKRNPPWKET LEKRSSRINS SRIDDSSQTK EEQDRSNKVR LIESEKFSSS RFSEKHQEIA EIGDTDEDED DDHHPPEELK REPSVVIPPS
101: PETVSKEAEL AAGWPAWLVS VAGEALVNWT PRRASTFEKL EKIGQGTYSS VYKARDLTNN KIVALKRVRF DLSDLESVKF MAREIIVMRR LDHPNVLKLE
201: GLITASVSSS LYLVFEYMDH DLVGLASIPG IKFSEPQVKC YMQQLLSGLH HCHSRGVLHR DIKGSNLLID SNGVLKIADF GLATFFDPQN CVPLTSRVVT
301: LWYRPPELLL GACHYGVGVD LWSTGCILGE LYSGKPILAG KTEVEQLHKI FKLCGSPTED YWRKLKLPPS AAFRPALPYG RRVAEMFKDL PTNVLSLLEA
401: LLSIDPDRRG SAARALESEY FRTEPFACDP SSLPKYPPSK EIDAKIRDDA KRQRPTQEKH ERQDSQTRRS HERKLIPPVK ANNPSLSTAV ENPYLRSCVP
501: GNSQRQMQDM TCNNPTSGRV SHSGPMMKNR NLSRLTYVKD NAAPRIPSYR ANSAGQGGGY VGSDQQMMDQ QRKELRTFNR ADTMDNSKRQ TKIPNDPSWY
601: DSGDNKMYMS GPLLAQPRKV DQMLEEHDRQ LQDFTRQKAK HCRN

Arabidopsis Description

AT5G44290 protein [Source:UniProtKB/TrEMBL;Acc:Q9FKV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.