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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX75801
CDX79176
CDX79807
CDX82454
CDX83464
CDX90099
CDX91876
CDX92637
CDX92638
CDX97626
CDX98522
CDY03933
CDY07174
CDY11016
CDY11776
CDY17916
CDY20096
CDY32326
CDY35481
CDY40826
CDY44250
CDY48504
CDY60279
CDY67475
CDY69317

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G64960.1 CDX90099 AT1G27630.1 12678503
AT5G64960.1 CDY03933 AT1G27630.1 12678503
AT5G64960.1 CDY11776 AT1G27630.1 12678503
AT5G64960.1 CDY60279 AT1G27630.1 12678503
AT5G64960.1 CDX79807 AT2G43710.1 20706207
AT5G64960.1 CDX83464 AT2G43710.1 20706207
AT5G64960.1 CDY17916 AT2G43710.1 20706207
AT5G64960.1 CDY44250 AT2G43710.1 20706207
AT5G64960.1 CDX75801 AT3G15000.1 12678503
AT5G64960.1 CDX82454 AT3G15000.1 12678503
AT5G64960.1 CDX97626 AT3G15000.1 12678503
AT5G64960.1 CDX98522 AT3G15000.1 12678503
AT5G64960.1 CDY20096 AT3G15000.1 12678503
AT5G64960.1 CDY32326 AT3G15000.1 12678503
AT5G64960.1 CDY35481 AT3G55760.1 20706207
AT5G64960.1 CDY40826 AT3G55760.1 20706207
AT5G64960.1 CDX79176 AT4G01090.1 21798944
AT5G64960.1 CDX91876 AT4G01090.1 21798944
AT5G64960.1 CDY07174 AT4G01090.1 21798944
AT5G64960.1 CDY48504 AT4G01090.1 21798944
AT5G64960.1 CDY67475 AT4G01090.1 21798944
AT5G64960.1 CDX92637 AT4G24500.1 21798944
AT5G64960.1 CDX92638 AT4G24500.1 21798944
AT5G64960.1 CDY11016 AT4G24500.1 21798944
AT5G64960.1 CDY69317 AT4G24500.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031892.1-P Field mustard nucleus 99.03 98.84
CDY31293 Canola nucleus 99.03 98.84
AT5G64960.1 Thale cress nucleus 93.42 94.15
CDY56227 Canola nucleus 86.46 87.65
CDY72385 Canola cytosol 28.05 86.31
CDX96988 Canola nucleus 83.95 85.27
CDX69849 Canola nucleus 83.56 84.87
VIT_07s0141g00280.t01 Wine grape cytosol 40.23 83.87
CDY18101 Canola cytosol 74.47 83.51
Zm00001d012392_P001 Maize cytosol 32.5 82.35
Solyc04g056280.2.1 Tomato nucleus 75.44 76.17
CDY08835 Canola cytosol 51.84 62.62
EES15089 Sorghum cytosol 37.72 60.37
Os08t0453800-00 Rice endoplasmic reticulum, plasma membrane 34.62 55.94
CDY14526 Canola cytosol 72.34 52.09
CDX94278 Canola cytosol, mitochondrion, nucleus, plasma membrane 26.5 49.64
CDY71137 Canola plastid 32.69 38.76
CDY54916 Canola mitochondrion 24.37 38.18
CDY48795 Canola nucleus 35.4 35.67
CDX99109 Canola cytosol, mitochondrion, nucleus, plastid 33.85 33.21
CDX86178 Canola cytosol, nucleus, plastid 35.78 32.74
CDX80672 Canola cytosol, plastid 35.98 32.52
CDY67158 Canola plastid 35.4 32.33
CDY45813 Canola cytosol 35.78 32.29
CDY18783 Canola plastid 35.98 32.18
CDX95237 Canola nucleus 35.2 31.87
CDY53230 Canola nucleus, plastid 35.98 31.85
CDY10826 Canola nucleus 32.88 31.84
CDX71637 Canola cytosol 35.4 31.55
CDY05828 Canola cytosol 35.4 31.5
CDX84882 Canola cytosol 35.59 30.92
CDX99520 Canola nucleus 36.56 30.78
CDX93753 Canola nucleus 37.14 30.77
CDY15287 Canola nucleus 36.75 30.74
CDY58380 Canola nucleus 34.82 30.72
CDY70545 Canola nucleus 36.94 30.51
CDY27801 Canola cytosol 34.24 30.36
CDY70577 Canola nucleus 36.75 30.35
CDY41930 Canola cytosol 34.43 30.32
CDX86879 Canola nucleus 36.17 30.31
CDY14916 Canola nucleus 36.17 30.11
CDY66485 Canola nucleus 36.17 30.02
CDY02525 Canola plastid 38.1 29.85
CDX68307 Canola plastid 35.59 29.82
CDY13111 Canola nucleus 35.4 29.8
CDY25738 Canola nucleus, plastid 37.91 29.74
CDX96330 Canola plastid 36.56 29.72
CDX72813 Canola plastid 36.17 29.4
CDY36688 Canola plastid 35.01 29.34
CDY60604 Canola nucleus 35.78 29.09
CDY25881 Canola plastid 38.3 29.03
CDY33146 Canola nucleus 35.78 28.95
CDY20858 Canola nucleus 35.78 28.95
CDY03697 Canola nucleus, plastid 35.98 28.66
CDY41270 Canola cytosol 31.14 28.6
CDY67268 Canola nucleus, plastid 35.78 28.46
CDY50511 Canola nucleus, plastid 37.91 28.36
CDX96534 Canola cytosol 35.01 28.33
CDX73077 Canola cytosol 35.01 28.33
CDY31076 Canola nucleus 34.04 27.85
CDY53144 Canola nucleus 35.78 27.57
CDY39924 Canola nucleus 35.01 27.3
CDY29169 Canola nucleus 35.01 27.3
CDY31800 Canola nucleus 35.59 27.1
CDY20686 Canola nucleus 34.43 27.09
CDY37004 Canola nucleus 34.04 27.08
CDX74282 Canola plastid 32.3 26.81
CDY34698 Canola plastid 32.5 26.71
CDX93496 Canola nucleus 34.82 26.67
CDX81891 Canola plastid 35.98 26.65
CDY55799 Canola plastid 32.3 26.63
CDX83825 Canola plastid 35.78 26.35
CDX96706 Canola nucleus 35.78 24.97
CDX89871 Canola mitochondrion, nucleus 34.82 24.9
CDY18179 Canola nucleus 34.82 24.23
CDX74463 Canola nucleus 28.63 24.1
CDY22631 Canola mitochondrion 35.59 22.09
CDY06363 Canola mitochondrion 35.4 21.92
CDY50891 Canola nucleus, plastid 35.4 19.12
CDX67429 Canola cytosol, plastid 34.04 18.97
CDY37546 Canola nucleus 32.5 16.06
CDX91965 Canola nucleus 32.11 16.02
CDY43266 Canola nucleus 30.17 14.62
Os01t0201000-01 Rice plasma membrane 2.13 8.59
Protein Annotations
Gene3D:1.10.510.10MapMan:13.1.1.2.3MapMan:15.3.2.1.1MapMan:18.4.3.1.3Gene3D:3.30.200.20GO:A0A078H931
UniProt:A0A078H931EnsemblPlants:CDY33994ProteinID:CDY33994ProteinID:CDY33994.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00055848001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF240InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE65A9SEG:seg::
Description
BnaC02g43430DBnaC02g43430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H931]
Coordinates
chrLK032325:-:403641..408351
Molecular Weight (calculated)
57296.8 Da
IEP (calculated)
9.496
GRAVY (calculated)
-0.866
Length
517 amino acids
Sequence
(BLAST)
001: MAAAACGQLN LEEPTPIRGS RSVDCFEKLE QIGEGTYGQV YMAKDIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIHLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHSGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLNGKPI LPGKTESEQL NKIYELCGSP DENNWPGVTK MPWYNQMKSS RPLKRRVREV YRHFDRHALE
301: LLEKMLVLDP SQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQMRHNEE AAKKQKLQHP QQQQHSRLPP QQHGVGQSHA APHWPGGPNH
401: PINNGPPPQL PAGGPSGHNY YQKARGGGAP GPNRYPPGGN QTGGYNNNQS RGGYGSGSYP PQGRGGAPYG GAGPRGASGG YGAGPPNYSQ GGGQYGGSGR
501: GQNPMGGARN QQYGWQP
Best Arabidopsis Sequence Match ( AT5G64960.1 )
(BLAST)
001: MAAAAFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIHLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLNGKPI LPGKTENEQL NKIYELCGSP DESNWPGVSK MPWYNQMKSS RPLKRRVREI YRHFDRHALE
301: LLEKMLVLDP SQRICAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQMRHNEE AAKKQKLQHP QQQHSRLPPQ QHGVGQSHAA PLWPAGPNHP
401: MNNNAPPPQI PAGGHYYGGK PRGGAPVPNR YPPSGNQTGG YNNQSRGGYS SGAYPPQGRG APYGAGPRGP SGGYGVGPPN YSQGGGQYGG SGGSGRGQNP
501: MGGARNQQYG WQP
Arabidopsis Description
CDKC-2Cyclin-dependent kinase C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4P1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.