CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	39.45	62.32
CDX81891	Canola	plastid	98.17	61.32
CDX83825	Canola	plastid	89.68	55.7
CDX96534	Canola	cytosol	79.13	53.99
CDX73077	Canola	cytosol	78.9	53.83
AT1G18670.3	Thale cress	nucleus	88.07	53.33
CDX96706	Canola	nucleus	90.14	53.04
KRH54601	Soybean	plastid	75.46	48.45
KRH56877	Soybean	nucleus, plastid	74.31	48.36
KRH63286	Soybean	nucleus	74.31	48.07
KRH03527	Soybean	nucleus, plastid	74.31	47.72
CDY72385	Canola	cytosol	18.12	47.02
CDY54916	Canola	mitochondrion	34.86	46.06
VIT_17s0000g06650.t01	Wine grape	plastid	72.02	45.77
Solyc03g115660.2.1	Tomato	nucleus	72.48	45.73
PGSC0003DMT400063133	Potato	nucleus	72.02	45.24
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	53.21	44.02
GSMUA_Achr6P24660_001	Banana	nucleus	65.83	44.02
GSMUA_Achr2P13490_001	Banana	nucleus	63.99	42.86
GSMUA_Achr4P28060_001	Banana	nucleus	65.37	42.35
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	64.45	42.32
CDY67158	Canola	plastid	54.59	42.05
CDX95237	Canola	nucleus	54.82	41.86
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	63.3	41.69
TraesCS2B01G209300.1	Wheat	plastid	65.37	41.19
CDY48795	Canola	nucleus	48.39	41.13
TraesCS2D01G190600.1	Wheat	plastid	65.14	41.04
HORVU2Hr1G034440.3	Barley	plastid	65.14	40.86
TraesCS2A01G182800.1	Wheat	plastid	64.68	40.75
GSMUA_Achr4P03350_001	Banana	nucleus	62.16	40.63
OQU90194	Sorghum	plastid	65.83	40.54
Zm00001d006759_P012	Maize	plastid	66.74	40.36
CDX99520	Canola	nucleus	56.65	40.23
CDX86879	Canola	nucleus	56.42	39.87
CDY37004	Canola	nucleus	59.4	39.85
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	63.76	39.77
Os07t0596600-02	Rice	plasma membrane	63.99	39.46
CDX86178	Canola	cytosol, nucleus, plastid	50.92	39.29
CDX80672	Canola	cytosol, plastid	51.38	39.16
CDX71637	Canola	cytosol	52.06	39.14
CDY05828	Canola	cytosol	52.06	39.07
CDY18783	Canola	plastid	51.61	38.93
CDY45813	Canola	cytosol	51.15	38.92
CDY53230	Canola	nucleus, plastid	51.83	38.7
CDY66485	Canola	nucleus	54.59	38.2
CDY15287	Canola	nucleus	54.13	38.19
CDY14916	Canola	nucleus	54.36	38.16
CDX93753	Canola	nucleus	54.59	38.14
CDY25738	Canola	nucleus, plastid	57.34	37.94
CDX74282	Canola	plastid	54.13	37.88
CDY70545	Canola	nucleus	54.36	37.86
CDY70577	Canola	nucleus	54.36	37.86
CDY10826	Canola	nucleus	46.33	37.83
Zm00001d022041_P001	Maize	plastid	64.91	37.78
CDY02525	Canola	plastid	57.11	37.73
CDX84882	Canola	cytosol	51.15	37.48
CDY13111	Canola	nucleus	52.75	37.46
CDY34698	Canola	plastid	53.67	37.2
CDY58380	Canola	nucleus	50.0	37.2
CDY55799	Canola	plastid	53.44	37.16
CDX74463	Canola	nucleus	52.29	37.13
CDX68307	Canola	plastid	52.52	37.12
CDY27801	Canola	cytosol	49.54	37.05
CDY60604	Canola	nucleus	53.67	36.79
CDY31076	Canola	nucleus	53.21	36.71
CDY36688	Canola	plastid	51.83	36.63
CDY41930	Canola	cytosol	49.31	36.63
CDY33146	Canola	nucleus	53.67	36.62
CDY20858	Canola	nucleus	53.67	36.62
CDY25881	Canola	plastid	56.88	36.36
CDX96330	Canola	plastid	52.52	36.01
CDY08835	Canola	cytosol	35.32	35.98
CDY50511	Canola	nucleus, plastid	56.65	35.75
CDX93496	Canola	nucleus	55.28	35.7
CDX72813	Canola	plastid	52.06	35.69
CDY20686	Canola	nucleus	53.44	35.46
CDY03697	Canola	nucleus, plastid	52.29	35.13
CDY67268	Canola	nucleus, plastid	52.29	35.08
CDY53144	Canola	nucleus	53.44	34.72
CDY29169	Canola	nucleus	52.52	34.54
CDY39924	Canola	nucleus	52.52	34.54
CDY31800	Canola	nucleus	53.67	34.46
CDY56227	Canola	nucleus	39.45	33.73
CDX96988	Canola	nucleus	38.99	33.4
CDX69849	Canola	nucleus	38.76	33.2
CDY33994	Canola	nucleus	38.76	32.69
CDY31293	Canola	nucleus	38.53	32.43
CDY41270	Canola	cytosol	41.51	32.15
CDX89871	Canola	mitochondrion, nucleus	52.98	31.95
CDY18101	Canola	cytosol	33.72	31.89
CDY18179	Canola	nucleus	53.21	31.22
CDX67429	Canola	cytosol, plastid	59.63	28.02
CDY22631	Canola	mitochondrion	52.75	27.61
CDY06363	Canola	mitochondrion	52.52	27.43
CDY50891	Canola	nucleus, plastid	54.59	24.87
CDX91965	Canola	nucleus	55.05	23.17
CDY37546	Canola	nucleus	54.36	22.66
CDY14526	Canola	cytosol	36.01	21.87
CDY43266	Canola	nucleus	49.77	20.34

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:A0A078JZP6	UniProt:A0A078JZP6	EnsemblPlants:CDY71137
ProteinID:CDY71137	ProteinID:CDY71137.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00011590001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEBA0D	SEG:seg	:	:	:

Description

BnaC08g49430DBnaC08g49430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZP6]

Coordinates

chrLK044625:-:126..1946

Molecular Weight (calculated)

49029.0 Da

IEP (calculated)

9.013

GRAVY (calculated)

-0.286

Length

436 amino acids

Sequence
(BLAST)

001: MGCVNSKQTV SVTPAINHSG VFKDNNSVQE PSPAVEKKLV SWRSKSSKKS GSESGRASSN SRSESLSFRL GKYLEAEQVA AGWPAWLSNV AGEAIHGWIP
101: FRSDAFEKLE KIGQGTYSSV FRARETETGK IVALKKVRFD NFEPESVRFM AREILILRRL DHPNIIKLQG LVTSKLSCNI HLVFEYMEHD LTGLLSRPDI
201: NFTTPLIKCY MKQLLSGLDH CHARGVMHRD IKGSNLLVNN EGVLKVADFG LANFCNASRN KQPLTSRVVT LWYRPPELLL GATEYGASVD LWSVGCVFAE
301: LLLKKPVLQG RTEVEQLHKI FKLCGSPPED YWRKTKLPHA MLFKPQQHYD GCLRETFKDL SDADVSLIET LLSIEPNKRG IASTALVSQY FTTKPYACDP
401: STLPVYSPSK EIDAKHREET TRSEFHTLLS FIMLYL

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.