CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036018.1-P	Field mustard	nucleus	98.39	98.71
CDY14916	Canola	nucleus	98.39	98.71
CDY13111	Canola	nucleus	84.59	85.83
AT5G44290.3	Thale cress	nucleus	87.64	84.78
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	71.59	84.63
CDY60604	Canola	nucleus	86.2	84.43
CDY20858	Canola	nucleus	86.52	84.35
CDY33146	Canola	nucleus	86.52	84.35
CDY54916	Canola	mitochondrion	43.02	81.21
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	26.16	59.06
CDX89871	Canola	mitochondrion, nucleus	66.93	57.68
CDY18179	Canola	nucleus	68.22	57.2
CDY71137	Canola	plastid	38.2	54.59
CDY10826	Canola	nucleus	41.41	48.31
CDY67158	Canola	plastid	42.7	47.0
CDX95237	Canola	nucleus	42.54	46.41
CDY02525	Canola	plastid	48.48	45.76
CDY25738	Canola	nucleus, plastid	48.31	45.68
Solyc10g008280.2.1	Tomato	nucleus	49.76	45.59
PGSC0003DMT400034197	Potato	nucleus	48.96	45.25
KRH25594	Soybean	nucleus	49.76	44.6
CDY25881	Canola	plastid	48.8	44.57
KRH26956	Soybean	nucleus	49.76	44.54
CDY45813	Canola	cytosol	40.93	44.5
CDY48795	Canola	nucleus	36.6	44.44
KRH55951	Soybean	nucleus	49.6	44.4
CDX71637	Canola	cytosol	41.25	44.31
CDX86879	Canola	nucleus	43.82	44.25
CDY05828	Canola	cytosol	41.25	44.23
CDX99520	Canola	nucleus	43.5	44.14
Solyc07g053910.2.1	Tomato	nucleus, plastid	50.56	43.99
KRH22379	Soybean	nucleus	49.6	43.95
CDY50511	Canola	nucleus, plastid	48.64	43.85
CDY58380	Canola	nucleus	41.09	43.69
PGSC0003DMT400047231	Potato	nucleus	50.24	43.65
CDX80672	Canola	cytosol, plastid	39.17	42.66
CDX84882	Canola	cytosol	40.61	42.52
CDX68307	Canola	plastid	41.89	42.3
CDX86178	Canola	cytosol, nucleus, plastid	38.36	42.3
CDY72385	Canola	cytosol	11.4	42.26
CDY18783	Canola	plastid	39.17	42.21
CDY36688	Canola	plastid	41.73	42.14
CDY27801	Canola	cytosol	39.17	41.85
CDY53230	Canola	nucleus, plastid	39.0	41.61
CDY41930	Canola	cytosol	39.0	41.4
CDY70545	Canola	nucleus	41.41	41.21
CDX96330	Canola	plastid	42.05	41.2
CDY70577	Canola	nucleus	41.25	41.05
CDX72813	Canola	plastid	41.89	41.04
CDY29169	Canola	nucleus	43.66	41.03
CDY15287	Canola	nucleus	40.61	40.94
CDY39924	Canola	nucleus	43.5	40.87
CDX93753	Canola	nucleus	40.93	40.87
CDY31076	Canola	nucleus	41.41	40.82
CDX93496	Canola	nucleus	44.14	40.74
CDY53144	Canola	nucleus	43.82	40.69
CDY31800	Canola	nucleus	44.3	40.65
CDY41270	Canola	cytosol	36.6	40.5
CDY03697	Canola	nucleus, plastid	42.05	40.37
CDY67268	Canola	nucleus, plastid	41.73	40.0
CDY20686	Canola	nucleus	41.09	38.97
CDX73077	Canola	cytosol	39.65	38.65
CDX96534	Canola	cytosol	39.49	38.5
CDX96988	Canola	nucleus	30.5	37.33
CDX81891	Canola	plastid	41.73	37.25
CDX69849	Canola	nucleus	30.34	37.13
CDY08835	Canola	cytosol	25.04	36.45
CDY56227	Canola	nucleus	29.7	36.27
CDX83825	Canola	plastid	40.77	36.18
CDY33994	Canola	nucleus	30.02	36.17
CDY31293	Canola	nucleus	29.86	35.91
CDY18101	Canola	cytosol	26.16	35.36
CDY37004	Canola	nucleus	36.6	35.08
CDX96706	Canola	nucleus	40.77	34.28
CDX74463	Canola	nucleus	33.39	33.88
CDX74282	Canola	plastid	33.55	33.55
CDY34698	Canola	plastid	33.55	33.23
CDY55799	Canola	plastid	33.23	33.01
CDY22631	Canola	mitochondrion	43.5	32.53
CDY06363	Canola	mitochondrion	43.34	32.34
CDY50891	Canola	nucleus, plastid	43.82	28.53
CDX67429	Canola	cytosol, plastid	36.6	24.57
CDY14526	Canola	cytosol	27.77	24.09
CDX91965	Canola	nucleus	33.87	20.37
CDY37546	Canola	nucleus	34.19	20.36
CDY43266	Canola	nucleus	31.62	18.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:A0A078JJ40	UniProt:A0A078JJ40	EnsemblPlants:CDY66485
ProteinID:CDY66485	ProteinID:CDY66485.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00054418001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF326	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EB215F	SEG:seg	:	:	:

Description

BnaCnng51050DBnaCnng51050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ40]

Coordinates

chrLK035285:-:14361..17343

Molecular Weight (calculated)

70248.6 Da

IEP (calculated)

9.662

GRAVY (calculated)

-0.706

Length

623 amino acids

Sequence
(BLAST)

001: MGCIISKKKS PKRNHHHQRK ESSEKRSSSR IDDSSQSKEE QQDRSKFSST RLSPEIAEIG DTDEDEDEDK DKELKRKPST VVAKEEPEVA AGWPAWLVSV
101: AGEALVGWTP RRASTFEKLE KIGQGTYSSV YKARDLLDNK IVALKRVRFD LSDLESVKFM AREIIVMRRL DHPNVLKLQG LITASASSSL YLVFEYMDHD
201: LVGLASIPGI NFSQPQVKCY MKQLLSGLHH CHSRGVLHRD IKGSNLLIDS NGILKIADFG LATFFDPQNT VPLTSRVVTL WYRPPELLLG ACHYGVGVDL
301: WSAGCILGEL YSGKPILPGK TEVEQLHKIF KLCGSPTEDY WRKLKLPPSA AFRPALPYGR RVAEMFKDLP TNVLSLLEAL LSIDPDRRGS AAKALESEYF
401: NTEPFACDPS SLPKYPPSKE IDAKLRDDAK RQEKNERQDS QTRQSHERKL IPPLRANPSL TAAMENPYLR KCVPGHSARQ MQITKDMTSN NPTSGRVSHS
501: GPMMKNRNHS RFTYMKDNAA APSSRANLAG QSGSRVDTTG SSDQTIMDQQ RRNLRAFNRA DTMDNSKRQI KIPNDPSWYD AGDNKMYMSG PLLAQPRKVD
601: QMLEEHDRQL QEFTRQKAKH SRS

Best Arabidopsis Sequence Match ( AT5G44290.1 )
(BLAST)

001: MGCIISKKKS PKRNPPWKET LEKRSSRINS SRIDDSSQTK EEQDRSNKVR LIESEKFSSS RFSEKHQEIA EIGDTDEDED DDHHPPEELK REPSVVIPPS
101: PETVSKEAEL AAGWPAWLVS VAGEALVNWT PRRASTFEKL EKIGQGTYSS VYKARDLTNN KIVALKRVRF DLSDLESVKF MAREIIVMRR LDHPNVLKLE
201: GLITASVSSS LYLVFEYMDH DLVGLASIPG IKFSEPQVKC YMQQLLSGLH HCHSRGVLHR DIKGSNLLID SNGVLKIADF GLATFFDPQN CVPLTSRVVT
301: LWYRPPELLL GACHYGVGVD LWSTGCILGE LYSGKPILAG KTEVEQLHKI FKLCGSPTED YWRKLKLPPS AAFRPALPYG RRVAEMFKDL PTNVLSLLEA
401: LLSIDPDRRG SAARALESEY FRTEPFACDP SSLPKYPPSK EIDAKIRDDA KRQRPTQEKH ERQDSQTRRS HERKLIPPVK ANNPSLSTAV ENPYLRSCVP
501: GNSQRQMQDM TCNNPTSGRV SHSGPMMKNR NLSRLTYVKD NAAPRIPSYR ANSAGQGGGY VGSDQQMMDQ QRKELRTFNR ADTMDNSKRQ TKIPNDPSWY
601: DSGDNKMYMS GPLLAQPRKV DQMLEEHDRQ LQDFTRQKAK HCRN

Arabidopsis Description

AT5G44290 protein [Source:UniProtKB/TrEMBL;Acc:Q9FKV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.