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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37004 Canola nucleus 83.55 78.92
AT5G39420.1 Thale cress nucleus 80.62 76.86
CDX67429 Canola cytosol, plastid 83.88 55.5
CDX94278 Canola cytosol, mitochondrion, nucleus, plasma membrane 23.62 52.54
CDY71137 Canola plastid 37.13 52.29
KRG93581 Soybean plastid 45.28 47.44
KRH18441 Soybean nucleus 45.11 47.19
Solyc02g088330.2.1 Tomato cytosol, nucleus, plastid 46.09 43.07
PGSC0003DMT400003634 Potato plastid 46.42 42.99
GSMUA_Achr6P24660_001 Banana nucleus 45.28 42.64
CDY34698 Canola plastid 43.32 42.29
CDY55799 Canola plastid 43.16 42.26
CDY72385 Canola cytosol 11.56 42.26
CDX74282 Canola plastid 42.67 42.05
GSMUA_Achr2P13490_001 Banana nucleus 44.46 41.94
KRH01235 Soybean nucleus, plastid 45.93 41.9
KRH44946 Soybean nucleus 45.77 41.45
PGSC0003DMT400076796 Potato nucleus 45.6 41.3
CDX83825 Canola plastid 46.74 40.88
GSMUA_Achr5P01580_001 Banana nucleus, plastid 44.14 40.81
GSMUA_Achr4P28060_001 Banana nucleus 44.63 40.71
GSMUA_Achr3P30270_001 Banana nucleus, plastid 43.81 40.63
CDX96534 Canola cytosol 42.18 40.53
VIT_14s0108g01270.t01 Wine grape nucleus 46.91 40.45
CDX73077 Canola cytosol 42.02 40.38
GSMUA_Achr7P26440_001 Banana cytosol, nucleus, plastid 45.93 40.34
CDX81891 Canola plastid 45.6 40.11
GSMUA_Achr4P03350_001 Banana nucleus 43.0 39.58
OQU90194 Sorghum plastid 44.95 38.98
Os07t0596600-02 Rice plasma membrane 44.79 38.9
TraesCS2A01G182800.1 Wheat plastid 43.81 38.87
CDY48795 Canola nucleus 32.41 38.79
TraesCS2D01G190600.1 Wheat plastid 43.65 38.73
TraesCS2B01G209300.1 Wheat plastid 43.49 38.58
CDX96706 Canola nucleus 46.42 38.46
CDX99520 Canola nucleus 38.44 38.44
HORVU2Hr1G034440.3 Barley plastid 43.49 38.42
CDY54916 Canola mitochondrion 20.52 38.18
Zm00001d006759_P012 Maize plastid 44.79 38.14
CDX86879 Canola nucleus 38.11 37.93
CDX99109 Canola cytosol, mitochondrion, nucleus, plastid 31.92 37.19
CDX68307 Canola plastid 37.13 36.95
Zm00001d022041_P001 Maize plastid 44.79 36.72
CDX96330 Canola plastid 37.95 36.64
CDY15287 Canola nucleus 36.81 36.57
CDX93753 Canola nucleus 37.13 36.54
CDX72813 Canola plastid 37.78 36.48
CDY36688 Canola plastid 36.65 36.47
CDY70545 Canola nucleus 36.97 36.26
CDX95237 Canola nucleus 33.55 36.08
CDY70577 Canola nucleus 36.65 35.94
CDY67158 Canola plastid 33.06 35.87
CDY67268 Canola nucleus, plastid 37.78 35.69
CDY03697 Canola nucleus, plastid 37.62 35.59
CDY10826 Canola nucleus 30.94 35.58
CDY25738 Canola nucleus, plastid 37.95 35.36
CDX86178 Canola cytosol, nucleus, plastid 32.41 35.22
CDY02525 Canola plastid 37.78 35.15
CDY58380 Canola nucleus 33.22 34.81
CDX80672 Canola cytosol, plastid 32.41 34.79
CDY05828 Canola cytosol 32.57 34.42
CDY45813 Canola cytosol 32.08 34.38
CDY25881 Canola plastid 38.11 34.31
CDX71637 Canola cytosol 32.41 34.31
CDY18783 Canola plastid 32.25 34.26
CDY13111 Canola nucleus 33.88 33.88
CDY53230 Canola nucleus, plastid 32.08 33.73
CDY50511 Canola nucleus, plastid 37.95 33.72
CDY14916 Canola nucleus 33.88 33.49
CDY27801 Canola cytosol 31.76 33.45
CDY66485 Canola nucleus 33.88 33.39
CDX93496 Canola nucleus 36.48 33.19
CDY60604 Canola nucleus 34.2 33.02
CDX84882 Canola cytosol 31.92 32.94
CDY39924 Canola nucleus 35.5 32.88
CDY29169 Canola nucleus 35.5 32.88
CDY20858 Canola nucleus 34.2 32.86
CDY33146 Canola nucleus 34.2 32.86
CDY31076 Canola nucleus 33.71 32.75
CDY41930 Canola cytosol 30.94 32.37
CDY53144 Canola nucleus 35.18 32.19
CDY31800 Canola nucleus 35.18 31.81
CDY20686 Canola nucleus 33.71 31.51
CDY41270 Canola cytosol 27.85 30.37
CDX89871 Canola mitochondrion, nucleus 34.53 29.32
CDY56227 Canola nucleus 24.27 29.22
CDY33994 Canola nucleus 24.1 28.63
CDY31293 Canola nucleus 24.1 28.57
CDY08835 Canola cytosol 19.87 28.5
CDY18179 Canola nucleus 34.36 28.4
CDX96988 Canola nucleus 23.45 28.29
CDY18101 Canola cytosol 21.01 27.98
CDX69849 Canola nucleus 23.13 27.9
CDX91965 Canola nucleus 43.97 26.06
CDY37546 Canola nucleus 44.3 26.0
CDY06363 Canola mitochondrion 34.85 25.63
CDY22631 Canola mitochondrion 34.69 25.57
CDY43266 Canola nucleus 41.21 23.71
CDY50891 Canola nucleus, plastid 35.83 22.99
CDY14526 Canola cytosol 22.31 19.08
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7GO:A0A078CHJ6EnsemblPlants:CDX74463ProteinID:CDX74463
ProteinID:CDX74463.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00114339001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF327
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EDB533
SEG:seg:::::
Description
BnaA04g09260D
Coordinates
chrLK031801:-:485069..490734
Molecular Weight (calculated)
69388.7 Da
IEP (calculated)
9.894
GRAVY (calculated)
-0.579
Length
614 amino acids
Sequence
(BLAST)
001: MGCISSKNAS CLTDQGASPV HHRENSPEPD FSSLNQQHRV FVDHSLGASH NNRRSRKSKR LGVSLLSGLS AHRNVEAEQA AAGWPSWLFS VASEVVEGWV
101: PLKAEAFQKL EKIGQGTYSS VFRAREVETG RMVALKKVKF DSLQPESIRF MAREILILRK LNHPNIMKLE GIVTSRASRS IYLLFEYMEH DLSGLSSNPD
201: IRFTESQIKC YMQQLLWGLE HCHMQGVIHR DIKASNILVN NKGVLKVGDF GLANVVTAKN KHQLTSRVVT LWGLLAMECQ SICRTEIEQL HKIYKLCGSP
301: PDSFWRKTWL PHATSFRPQH TYEATLKRCR ELPTSGVSLL ETLLSMEPYK RGTASSALNS EYFLTTPYAC DPSSLPKYPP NKEMDAKYRD DMCRKRANLK
401: LRDSGVGRKH KRPNSYAKLP IRQDTFEDKN MRNDASITST THGNYYKFSD PPVTTGPAGG FVWAVKRRKH PDNISTLTYY QPSSRSQLSE TSVAFAKNAF
501: GLNSNLHNDS VWEVQGDNDD QIVDDVPSEG KLSRIGERQG SLNGCGLDFS QRYKDSPVKI NLEHLQSGKQ SISGPLIFKS SKIDEILQRN ESNIRQAVRK
601: FHFQRGKKIL ITQE
Best Arabidopsis Sequence Match ( AT5G39420.1 )
(BLAST)
001: MGCISSKNVS CLTDQGDSPL PEPGLLSTSQ QHRVLIDHSL EASHNSKRSR KSRRLGGSDL RIGVSLGSSH RNIEAEQAAA GWPAWLCSAA AEAVHGWVPL
101: KAEAFQKLEK IGQGTYSSVF RAREVETGKM VALKKVKFDN LQPESIRFMA REILILRKLN HPNIMKLEGI VTSRASSSIY LVFEYMEHDL AGLSSNPDIR
201: FTEPQIKCYM KQLLWGLEHC HMRGVIHRDI KASNILVNNK GVLKLGDFGL ANVVTPSNKN QLTSRVVTLW YRAPELLMGS TSYGVSVDLW SVGCVFAEIL
301: MGKPILKGRT EIEQLHKIYK LCGSPQDSFW KRTKLPHATS FKPQHTYEAT LRERCKDLSA TGVYLLETLL SMEPDKRGTA SSALNSEYFL TRPYACDPSS
401: LPKYPPNKEM DAKYRDDMRR KRANLKLRDS GVGRKHKRPH RAEYDPKNYA KLPIRKDTLE VKNIPNEASR ATTTTHGNYY KVSDLPMTTG PASGFAWAVK
501: RRKDPDNIST LTYYQPSSKS QLSGTSVAFA KNTFGLNLKP DNDSVWEVQG NNYDDVIEEV PSHESKLSRI GERHGSLDGS GLDFSQREED SPKKTLEHLQ
601: FGKQSISGPL IFKSGKIDEI LQRNESNIRQ AVRKSHLQRE QDDR
Arabidopsis Description
cdc2cAtAt5g39420 [Source:UniProtKB/TrEMBL;Acc:B5X564]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.