CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01235	Soybean	nucleus, plastid	90.56	91.23
KRG93581	Soybean	plastid	58.41	67.58
KRH18441	Soybean	nucleus	57.67	66.61
GSMUA_Achr6P24660_001	Banana	nucleus	49.56	51.53
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	49.56	51.14
PGSC0003DMT400003634	Potato	plastid	49.56	50.68
AT5G39420.1	Thale cress	nucleus	47.35	49.84
GSMUA_Achr2P13490_001	Banana	nucleus	47.35	49.31
KRH56877	Soybean	nucleus, plastid	48.38	48.96
Bra028432.1-P	Field mustard	nucleus, plastid	46.9	48.85
KRH63286	Soybean	nucleus	48.53	48.81
KRH54601	Soybean	plastid	48.82	48.75
CDY37004	Canola	nucleus	46.61	48.62
PGSC0003DMT400076796	Potato	nucleus	48.53	48.53
KRH03527	Soybean	nucleus, plastid	48.53	48.45
VIT_14s0108g01270.t01	Wine grape	nucleus	50.15	47.75
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	46.61	47.73
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	46.02	46.99
KRH21021	Soybean	cytosol	37.32	46.85
KRH50926	Soybean	nucleus	37.76	46.72
GSMUA_Achr4P28060_001	Banana	nucleus	46.17	46.51
KRH11268	Soybean	cytosol	37.02	46.4
KRH02197	Soybean	nucleus	37.32	46.34
HORVU2Hr1G034440.3	Barley	plastid	47.49	46.33
AT3G01085.3	Thale cress	plastid	43.07	46.28
TraesCS2A01G182800.1	Wheat	plastid	47.2	46.24
TraesCS2D01G190600.1	Wheat	plastid	47.2	46.24
GSMUA_Achr4P03350_001	Banana	nucleus	45.43	46.18
TraesCS2B01G209300.1	Wheat	plastid	47.05	46.1
CDX74463	Canola	nucleus	41.45	45.77
CDX74282	Canola	plastid	42.04	45.75
Os07t0596600-02	Rice	plasma membrane	47.49	45.54
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	46.9	45.49
CDY55799	Canola	plastid	42.04	45.45
CDY34698	Canola	plastid	42.04	45.31
OQU90194	Sorghum	plastid	46.9	44.92
KRH41090	Soybean	cytosol	36.73	44.86
KRH54127	Soybean	mitochondrion	36.87	44.72
KRG96918	Soybean	cytosol	37.61	44.58
KRH59775	Soybean	nucleus	36.43	44.5
KRH63826	Soybean	cytosol	23.89	44.38
Zm00001d006759_P012	Maize	plastid	46.31	43.55
KRH68662	Soybean	nucleus	37.91	43.41
KRH34013	Soybean	nucleus	36.87	43.1
KRG92786	Soybean	nucleus	36.73	42.93
KRH53817	Soybean	nucleus	30.24	41.67
Bra041128.1-P	Field mustard	plastid	32.6	41.39
Zm00001d022041_P001	Maize	plastid	45.43	41.12
KRH64126	Soybean	nucleus	29.79	40.4
KRH06043	Soybean	nucleus	34.22	39.93
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	27.73	39.75
KRH59494	Soybean	nucleus	24.34	39.57
KRH27243	Soybean	nucleus	40.41	38.7
KRH55283	Soybean	nucleus	40.12	38.31
KRH26282	Soybean	nucleus	39.97	38.22
KRH27807	Soybean	nucleus	34.81	37.88
KRH22087	Soybean	nucleus	39.68	37.78
KRH77684	Soybean	nucleus	35.25	37.7
KRH26151	Soybean	nucleus	39.68	36.8
KRH73489	Soybean	nucleus	27.43	36.05
KRG89779	Soybean	nucleus	27.58	35.96
KRH25594	Soybean	nucleus	36.73	35.83
KRH55951	Soybean	nucleus	36.58	35.63
KRH14656	Soybean	nucleus	26.99	35.47
KRH35103	Soybean	nucleus	30.83	34.66
KRH26956	Soybean	nucleus	35.55	34.63
KRH22379	Soybean	nucleus	35.55	34.28
CDX67429	Canola	cytosol, plastid	46.76	34.16
CDY37546	Canola	nucleus	43.36	28.11
CDX91965	Canola	nucleus	42.63	27.9
Bra001023.1-P	Field mustard	nucleus	43.22	27.54
Bra039147.1-P	Field mustard	nucleus	43.36	27.17
CDY43266	Canola	nucleus	40.12	25.49

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100781059	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	UniProt:A0A0R0IV35	EMBL:ACUP02004977
EnsemblPlantsGene:GLYMA_08G240700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH44946	ProteinID:KRH44946
ProteinID:KRH44946.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0003DEC32F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:20533557..20542796

Molecular Weight (calculated)

75671.9 Da

IEP (calculated)

9.779

GRAVY (calculated)

-0.634

Length

678 amino acids

Sequence
(BLAST)

001: MGCASSKKTV AGAGGSTPEG PCMVRSSSRR QGNNGSGRNR KGVAAEAREG EAREWSKGSL RGGTGSVSLR LSCRFVEAEQ NAAGWPPWLT SVAGEAIQGW
101: VPLKTDSFER LDKIGQGTYS SVFQAREVET GRMVALKKVR FDKLQAESIR FMAREILILR TLDHPNIMKL EGIITSQLSN SIYLVFEYME HDLAGLVASP
201: DIKFTDSQIK CYMRQLLSGI EHCHLKGIMH RDIKVSNILV NNEGVLKIAD FGLANTLSPN SKQPLTSRVV TLWYRPPELL LGSTSYGVSV DLWSVGCVFA
301: ELFLGKPILK GRTEVEQLHK IFKLCGSPPE EFWKKNKLPL ATMFKPKANY ETSLQERCRG FPATAVNLLE TLLSIDPSKR RTASSALMSE YFSTKPYACN
401: PSHLPKYPPS KEMDAKNREE VRRKKNGGKV REAVTSKRQR QVHKVSHDHI NFNQPALKEE MQNVSQNPGT NDGRAYVTKG KVAGAMHKEQ PKPSYDAKSE
501: AAQVVNGCNG YSVYSGPAPI SGSSGFTWAK RRKPKASSIL SDGSRSKVSA LDPTFAKGTY DLTEHGIEVS ERKHSYNTSH RDETSSYVSK KYQAPLVQQK
601: SFDVADTYNS NYYMDFDFTD KMDALIDTQG HRKHDEPVEQ SVPNMIPSNK NEELLHWNEN DMRQSLRKSR LGREHSQE

Best Arabidopsis Sequence Match ( AT5G39420.1 )
(BLAST)

001: MGCISSKNVS CLTDQGDSPL PEPGLLSTSQ QHRVLIDHSL EASHNSKRSR KSRRLGGSDL RIGVSLGSSH RNIEAEQAAA GWPAWLCSAA AEAVHGWVPL
101: KAEAFQKLEK IGQGTYSSVF RAREVETGKM VALKKVKFDN LQPESIRFMA REILILRKLN HPNIMKLEGI VTSRASSSIY LVFEYMEHDL AGLSSNPDIR
201: FTEPQIKCYM KQLLWGLEHC HMRGVIHRDI KASNILVNNK GVLKLGDFGL ANVVTPSNKN QLTSRVVTLW YRAPELLMGS TSYGVSVDLW SVGCVFAEIL
301: MGKPILKGRT EIEQLHKIYK LCGSPQDSFW KRTKLPHATS FKPQHTYEAT LRERCKDLSA TGVYLLETLL SMEPDKRGTA SSALNSEYFL TRPYACDPSS
401: LPKYPPNKEM DAKYRDDMRR KRANLKLRDS GVGRKHKRPH RAEYDPKNYA KLPIRKDTLE VKNIPNEASR ATTTTHGNYY KVSDLPMTTG PASGFAWAVK
501: RRKDPDNIST LTYYQPSSKS QLSGTSVAFA KNTFGLNLKP DNDSVWEVQG NNYDDVIEEV PSHESKLSRI GERHGSLDGS GLDFSQREED SPKKTLEHLQ
601: FGKQSISGPL IFKSGKIDEI LQRNESNIRQ AVRKSHLQRE QDDR

Arabidopsis Description

cdc2cAtAt5g39420 [Source:UniProtKB/TrEMBL;Acc:B5X564]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.