Factsheet for Bra028432.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37004	Canola	nucleus	97.85	98.0
AT5G39420.1	Thale cress	nucleus	85.87	86.8
CDX67429	Canola	cytosol, plastid	98.77	69.29
KRG93581	Soybean	plastid	49.92	55.46
KRH18441	Soybean	nucleus	49.16	54.51
GSMUA_Achr6P24660_001	Banana	nucleus	49.0	48.93
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	48.85	48.4
PGSC0003DMT400003634	Potato	plastid	49.0	48.11
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	47.77	46.98
KRH44946	Soybean	nucleus	48.85	46.9
KRH01235	Soybean	nucleus, plastid	48.39	46.81
PGSC0003DMT400076796	Potato	nucleus	48.23	46.31
Bra015920.1-P	Field mustard	cytosol	45.01	45.85
GSMUA_Achr2P13490_001	Banana	nucleus	45.78	45.78
Bra041128.1-P	Field mustard	plastid	37.48	45.69
VIT_14s0108g01270.t01	Wine grape	nucleus	49.92	45.65
GSMUA_Achr4P28060_001	Banana	nucleus	46.39	44.87
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	48.08	44.78
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	45.47	44.58
GSMUA_Achr4P03350_001	Banana	nucleus	45.01	43.93
OQU90194	Sorghum	plastid	47.47	43.64
TraesCS2D01G190600.1	Wheat	plastid	46.39	43.64
TraesCS2B01G209300.1	Wheat	plastid	46.39	43.64
Os07t0596600-02	Rice	plasma membrane	47.31	43.56
Bra016547.1-P	Field mustard	nucleus	49.62	43.53
TraesCS2A01G182800.1	Wheat	plastid	46.24	43.5
HORVU2Hr1G034440.3	Barley	plastid	45.93	43.02
Zm00001d006759_P012	Maize	plastid	47.47	42.86
Bra037899.1-P	Field mustard	nucleus	39.63	41.82
Bra027966.1-P	Field mustard	nucleus	35.94	41.56
Bra003921.1-P	Field mustard	plastid	39.17	41.0
Bra028011.1-P	Field mustard	nucleus	39.02	40.64
Zm00001d022041_P001	Maize	plastid	46.7	40.59
Bra016132.1-P	Field mustard	plastid	39.63	40.57
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	35.18	40.53
Bra010213.1-P	Field mustard	nucleus	38.71	40.26
Bra007973.1-P	Field mustard	nucleus, plastid	39.78	40.09
Bra040637.1-P	Field mustard	plastid	35.33	39.79
Bra030962.1-P	Field mustard	plastid	39.94	39.45
Bra035716.1-P	Field mustard	cytosol	34.41	38.62
Bra039466.1-P	Field mustard	plastid	34.56	38.59
Bra022756.1-P	Field mustard	cytosol	33.79	38.46
Bra038097.1-P	Field mustard	plastid	40.25	38.42
Bra027895.1-P	Field mustard	nucleus	37.79	37.05
Bra036018.1-P	Field mustard	nucleus	35.33	37.04
Bra024341.1-P	Field mustard	cytosol	22.43	36.68
Bra027540.1-P	Field mustard	nucleus	35.79	36.46
Bra030788.1-P	Field mustard	nucleus	35.64	35.91
Bra031674.1-P	Field mustard	nucleus	37.33	35.01
Bra028333.1-P	Field mustard	nucleus	27.04	34.65
Bra035472.1-P	Field mustard	nucleus	37.33	34.62
Bra031892.1-P	Field mustard	nucleus	27.04	33.98
Bra009045.1-P	Field mustard	nucleus	26.11	33.4
Bra015260.1-P	Field mustard	mitochondrion, nucleus	35.94	32.37
Bra020008.1-P	Field mustard	nucleus	37.33	32.23
Bra039147.1-P	Field mustard	nucleus	48.85	29.39
Bra001023.1-P	Field mustard	nucleus	47.77	29.23
Bra013662.1-P	Field mustard	nucleus	32.1	29.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra028432	EnsemblPlants:Bra028432.1	EnsemblPlants:Bra028432.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EI17	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF327	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00025432A2	SEG:seg

Description

AT5G39420 (E=1e-310) cdc2cAt | cdc2cAt (Arabidopsis thaliana cdc2c); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA02:+:275245..277879

Molecular Weight (calculated)

73481.5 Da

IEP (calculated)

9.818

GRAVY (calculated)

-0.666

Length

651 amino acids

Sequence
(BLAST)

001: MGCISSKNVS YLGDQSASPV QDRENTPGPD FSSTNQHHRV FVDHSLEASQ NINRRSRKSK RLGGSDSRVG KSLLSGLSHR NIEAEHAAAG WPSWLCEVAS
101: EAVHGWVPLK AEAFQKLEKI GQGTYSSVFR AREVETGKMV ALKKVKFDNL QPESIRFMAR EILILRKLNH PNIMKLEGII TSRASSSIYL VFEYMEHDLA
201: GLSSNPDIRF TESQIKCYMQ QLLWGLEHCH MRGVIHRDIK ASNILVNNKG VLKLGDFGLA NVVTAKNKHQ LTSRVVTLWY RAPELLMGST SYGVSIDLWS
301: VGCVFAEILM GKPILKGRTE IEQLHKIYKL CGSPPDSFWK KTRLPHATSF RPQHTYEATL RERCKELSTT GVLLLETLLS MEAYKRGTAS SALNSEYFLT
401: RPYACDPSSL PKYPPNKEMD AKNRDDMRRK RANLKLRESG VGRKHKRPHR EEQDPNSYAK LPIRQDTFED KNITNEEGPR ATTTTHGNYY KLSDLPLTTG
501: PASGFPWAVK RRKDPDNIST LTYYQPSSRS QLSETSAAFA KNTFGLNLKP ENESAYEIQG DNDDQIMEEL PSEDKLSRTG KRHGSLDGSG LDFSQREEDS
601: PLKKNLEHLQ FGKQSISGPL IFKSGKIDEI LQRNESNIRQ AVRKSHIKMG K

Best Arabidopsis Sequence Match ( AT5G39420.1 )
(BLAST)

001: MGCISSKNVS CLTDQGDSPL PEPGLLSTSQ QHRVLIDHSL EASHNSKRSR KSRRLGGSDL RIGVSLGSSH RNIEAEQAAA GWPAWLCSAA AEAVHGWVPL
101: KAEAFQKLEK IGQGTYSSVF RAREVETGKM VALKKVKFDN LQPESIRFMA REILILRKLN HPNIMKLEGI VTSRASSSIY LVFEYMEHDL AGLSSNPDIR
201: FTEPQIKCYM KQLLWGLEHC HMRGVIHRDI KASNILVNNK GVLKLGDFGL ANVVTPSNKN QLTSRVVTLW YRAPELLMGS TSYGVSVDLW SVGCVFAEIL
301: MGKPILKGRT EIEQLHKIYK LCGSPQDSFW KRTKLPHATS FKPQHTYEAT LRERCKDLSA TGVYLLETLL SMEPDKRGTA SSALNSEYFL TRPYACDPSS
401: LPKYPPNKEM DAKYRDDMRR KRANLKLRDS GVGRKHKRPH RAEYDPKNYA KLPIRKDTLE VKNIPNEASR ATTTTHGNYY KVSDLPMTTG PASGFAWAVK
501: RRKDPDNIST LTYYQPSSKS QLSGTSVAFA KNTFGLNLKP DNDSVWEVQG NNYDDVIEEV PSHESKLSRI GERHGSLDGS GLDFSQREED SPKKTLEHLQ
601: FGKQSISGPL IFKSGKIDEI LQRNESNIRQ AVRKSHLQRE QDDR

Arabidopsis Description

cdc2cAtAt5g39420 [Source:UniProtKB/TrEMBL;Acc:B5X564]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.