Factsheet for GSMUA_Achr4P03350_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	70.76	71.3
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	71.51	68.24
CDY71137	Canola	plastid	40.63	62.16
GSMUA_Achr6P24660_001	Banana	nucleus	60.57	61.96
TraesCS2D01G190600.1	Wheat	plastid	59.97	57.8
TraesCS2A01G182800.1	Wheat	plastid	59.97	57.8
TraesCS2B01G209300.1	Wheat	plastid	59.82	57.66
HORVU2Hr1G034440.3	Barley	plastid	59.97	57.55
VIT_17s0000g06650.t01	Wine grape	plastid	58.32	56.71
Os07t0596600-02	Rice	plasma membrane	59.97	56.58
OQU90194	Sorghum	plastid	59.67	56.21
GSMUA_Achr2P13490_001	Banana	nucleus	54.72	56.07
GSMUA_Achr4P28060_001	Banana	nucleus	56.22	55.72
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	55.17	55.42
KRH63286	Soybean	nucleus	55.47	54.9
KRH54601	Soybean	plastid	55.47	54.49
Solyc03g115660.2.1	Tomato	nucleus	56.22	54.27
Zm00001d006759_P012	Maize	plastid	58.47	54.09
PGSC0003DMT400063133	Potato	nucleus	55.92	53.75
KRH56877	Soybean	nucleus, plastid	53.22	52.99
KRH03527	Soybean	nucleus, plastid	53.37	52.43
Zm00001d022041_P001	Maize	plastid	58.32	51.94
GSMUA_Achr6P20270_001	Banana	plastid	32.08	51.57
KRG93581	Soybean	plastid	44.68	50.85
KRH18441	Soybean	nucleus	44.68	50.77
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	49.63	50.38
PGSC0003DMT400003634	Potato	plastid	49.03	49.32
VIT_14s0108g01270.t01	Wine grape	nucleus	52.32	49.02
Bra015920.1-P	Field mustard	cytosol	46.33	48.36
CDX73077	Canola	cytosol	46.18	48.2
CDX96534	Canola	cytosol	45.88	47.89
AT1G74330.1	Thale cress	nucleus	50.08	47.78
GSMUA_Achr6P07970_001	Banana	plastid	38.53	47.68
GSMUA_Achr6P02960_001	Banana	cytosol	25.49	47.35
CDX81891	Canola	plastid	49.33	47.13
CDX83825	Canola	plastid	49.33	46.87
AT1G18670.3	Thale cress	nucleus	50.37	46.67
PGSC0003DMT400076796	Potato	nucleus	46.48	45.72
KRH44946	Soybean	nucleus	46.18	45.43
AT5G39420.1	Thale cress	nucleus	43.78	45.34
KRH01235	Soybean	nucleus, plastid	45.73	45.32
Bra028432.1-P	Field mustard	nucleus, plastid	43.93	45.01
GSMUA_Achr6P07440_001	Banana	cytosol	41.98	44.87
CDY37004	Canola	nucleus	43.48	44.62
GSMUA_Achr5P26940_001	Banana	nucleus	39.43	44.43
CDX96706	Canola	nucleus	49.03	44.13
Bra016547.1-P	Field mustard	nucleus	48.73	43.8
GSMUA_Achr11P...	Banana	plastid	39.43	43.54
GSMUA_Achr11P...	Banana	plastid	38.83	43.02
CDX74463	Canola	nucleus	39.58	43.0
GSMUA_Achr10P...	Banana	cytosol	31.33	42.05
CDY55799	Canola	plastid	39.28	41.79
CDX74282	Canola	plastid	38.98	41.73
CDY34698	Canola	plastid	39.13	41.49
AT3G01085.3	Thale cress	plastid	38.98	41.2
GSMUA_Achr6P28920_001	Banana	plastid	40.63	40.81
GSMUA_Achr2P02360_001	Banana	plastid	39.28	40.81
GSMUA_Achr5P16890_001	Banana	nucleus	41.38	39.94
GSMUA_Achr8P08480_001	Banana	nucleus	38.68	39.03
GSMUA_Achr2P05620_001	Banana	cytosol	38.83	38.48
GSMUA_Achr10P...	Banana	nucleus	41.98	37.28
Bra041128.1-P	Field mustard	plastid	29.69	37.08
GSMUA_Achr5P05370_001	Banana	nucleus	27.59	35.66
CDX67429	Canola	cytosol, plastid	43.78	31.47
GSMUA_Achr6P17460_001	Banana	cytosol	41.53	29.44
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	30.13	29.05
GSMUA_Achr9P08070_001	Banana	nucleus	41.08	28.9
CDY37546	Canola	nucleus	40.33	25.72
CDX91965	Canola	nucleus	39.88	25.68
Bra001023.1-P	Field mustard	nucleus	40.18	25.19
Bra039147.1-P	Field mustard	nucleus	40.33	24.86
CDY43266	Canola	nucleus	37.18	23.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G03350_001
EnsemblPlants:GSMUA_Achr4P03350_001	EnsemblPlants:GSMUA_Achr4T03350_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SKQ2	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294D931	SEG:seg

Description

IBS1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G03350_001]

Coordinates

chr4:+:2668035..2675618

Molecular Weight (calculated)

75312.0 Da

IEP (calculated)

8.323

GRAVY (calculated)

-0.625

Length

667 amino acids

Sequence
(BLAST)

001: MGCAASNEAV SVTPAVDSAG ILRDQRASSR KHRSGRSSRR GYCGSKEEED RIELEEHGKA SEDCARLQKF RLGNLHSYIE GEQVAAGWPS WLSAVAGEAI
101: QGWVPLKADS FEKLEKIGQG TYSTVFRARD LDTGKIVALK KVRFDNSDPE SIRFMAREIK ILRMLDHPNI MKLEGLITSR LSCSLYLVFE YMEHDLAGLS
201: SCPDINFSES QVKCYMRQLL SGLEHCHLHN IIHRDIKGAN LLVNNEGVLK MADFGLANFY SPGHKQPLTS RVVTLWYRPP ELLLGSTDYE ATVDLWSVGC
301: VFAEMFVGRP ILQGRTEVEQ LHKIFRLCGS PPDEYWKKSK LPHATIFKPH NRYKSSFQES FKNLPPSTFS LLEKFLSIEP YKRGTTSSAL ASEYFRTKPY
401: ACESSDLPKY PPTKEIDTKN YDELHRRKVA GRGHGSEAIV RPLRSNKASQ EPGGLSKIAD SKEESWINVT GIDRNNVKKD HLRVDGETRL FVDLQPIPLI
501: THPDDGHNIK CNSQEDHADG RSCGTSNSKT RLSFARDPSS IENVKNKLYF EGQVNGSTHN VHAGSKGHGS IELAKHAIVK NWTRLEHPQS FDSSDIYYSQ
601: DPYCLNCDLA SLDKSQGFHD QDRVEFSGPL LSQTHKVDEL LQQHERHIRQ AVRRSWIQRV TGRNQGK

Best Arabidopsis Sequence Match ( AT1G18670.3 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKTMMLI TNKKKRMFYD

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.