Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71137 | Canola | plastid | 53.33 | 88.07 |
| CDX83825 | Canola | plastid | 85.28 | 87.46 |
| CDX81891 | Canola | plastid | 82.36 | 84.96 |
| CDX96706 | Canola | nucleus | 85.56 | 83.13 |
| Bra016547.1-P | Field mustard | nucleus | 85.0 | 82.48 |
| AT1G74330.1 | Thale cress | nucleus | 77.5 | 79.83 |
| KRH54601 | Soybean | plastid | 64.58 | 68.48 |
| KRH63286 | Soybean | nucleus | 63.75 | 68.1 |
| VIT_17s0000g06650.t01 | Wine grape | plastid | 64.44 | 67.64 |
| KRH56877 | Soybean | nucleus, plastid | 62.64 | 67.31 |
| KRH03527 | Soybean | nucleus, plastid | 63.33 | 67.16 |
| Solyc03g115660.2.1 | Tomato | nucleus | 63.19 | 65.85 |
| PGSC0003DMT400063133 | Potato | nucleus | 63.06 | 65.42 |
| GSMUA_Achr6P24660_001 | Banana | nucleus | 52.08 | 57.52 |
| GSMUA_Achr2P13490_001 | Banana | nucleus | 50.0 | 55.3 |
| GSMUA_Achr3P30270_001 | Banana | nucleus, plastid | 50.69 | 55.14 |
| OQU90194 | Sorghum | plastid | 53.47 | 54.38 |
| GSMUA_Achr5P01580_001 | Banana | nucleus, plastid | 50.14 | 54.37 |
| GSMUA_Achr4P28060_001 | Banana | nucleus | 50.69 | 54.23 |
| TraesCS2A01G182800.1 | Wheat | plastid | 51.81 | 53.9 |
| TraesCS2B01G209300.1 | Wheat | plastid | 51.81 | 53.9 |
| TraesCS2D01G190600.1 | Wheat | plastid | 51.81 | 53.9 |
| HORVU2Hr1G034440.3 | Barley | plastid | 51.81 | 53.67 |
| Zm00001d006759_P012 | Maize | plastid | 52.92 | 52.84 |
| Os07t0596600-02 | Rice | plasma membrane | 51.67 | 52.62 |
| GSMUA_Achr7P26440_001 | Banana | cytosol, nucleus, plastid | 50.56 | 52.07 |
| AT5G39420.1 | Thale cress | nucleus | 45.69 | 51.09 |
| GSMUA_Achr4P03350_001 | Banana | nucleus | 46.67 | 50.37 |
| Zm00001d022041_P001 | Maize | plastid | 51.81 | 49.8 |
| AT1G54610.1 | Thale cress | nucleus | 35.42 | 44.58 |
| AT1G33770.1 | Thale cress | nucleus | 37.22 | 43.65 |
| AT3G01085.3 | Thale cress | plastid | 37.78 | 43.11 |
| AT5G50860.1 | Thale cress | nucleus | 34.72 | 43.1 |
| AT4G10010.2 | Thale cress | nucleus | 38.61 | 42.84 |
| AT1G53050.1 | Thale cress | nucleus, plastid | 40.83 | 42.36 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 34.44 | 41.82 |
| AT1G71530.1 | Thale cress | plastid | 37.08 | 40.76 |
| AT1G57700.1 | Thale cress | nucleus | 38.89 | 40.46 |
| AT5G44290.3 | Thale cress | nucleus | 35.14 | 39.29 |
| AT1G09600.1 | Thale cress | nucleus | 38.33 | 38.66 |
| AT5G10270.1 | Thale cress | nucleus | 27.08 | 38.61 |
| AT4G22940.2 | Thale cress | cytosol | 29.58 | 38.04 |
| AT5G64960.1 | Thale cress | nucleus | 26.67 | 37.43 |
| AT1G03740.1 | Thale cress | nucleus | 35.69 | 34.73 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | EntrezGene:838448 | UniProt:A0A1P8AQ94 | ProteinID:ANM58800.1 |
| ArrayExpress:AT1G18670 | EnsemblPlantsGene:AT1G18670 | RefSeq:AT1G18670 | TAIR:AT1G18670 | RefSeq:AT1G18670-TAIR-G | EnsemblPlants:AT1G18670.3 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | Symbol:IBS1 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| RefSeq:NP_001321211.1 | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 |
| PANTHER:PTHR24056:SF188 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI000849064A | SEG:seg | : | : | : | : |
Description
IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
Coordinates
chr1:-:6426785..6430912
Molecular Weight (calculated)
81000.2 Da
IEP (calculated)
9.191
GRAVY (calculated)
-0.626
Length
720 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKTMMLI TNKKKRMFYD
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKTMMLI TNKKKRMFYD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.