Factsheet for AT1G53050.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02525	Canola	plastid	87.61	92.12
Bra030962.1-P	Field mustard	plastid	87.46	92.11
CDY25738	Canola	nucleus, plastid	87.32	91.96
CDY25881	Canola	plastid	89.34	90.91
Bra038097.1-P	Field mustard	plastid	89.34	90.91
CDY50511	Canola	nucleus, plastid	89.34	89.72
VIT_19s0014g02670.t01	Wine grape	nucleus	72.19	70.37
Solyc07g063130.2.1	Tomato	plastid	72.77	69.94
PGSC0003DMT400032406	Potato	nucleus	72.91	69.79
KRH27243	Soybean	nucleus	71.04	69.63
KRH55283	Soybean	nucleus	71.18	69.58
KRH22087	Soybean	nucleus	71.33	69.52
VIT_05s0124g00500.t01	Wine grape	cytosol	40.63	68.28
KRH26151	Soybean	nucleus	71.47	67.85
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	41.35	65.83
GSMUA_Achr10P...	Banana	nucleus	64.84	59.92
EES02288	Sorghum	cytosol	57.2	57.37
HORVU3Hr1G026900.7	Barley	cytosol	56.34	57.16
TraesCS3D01G141000.1	Wheat	cytosol	56.34	57.08
TraesCS3B01G158600.1	Wheat	cytosol	56.05	56.79
TraesCS3A01G313300.1	Wheat	cytosol	56.05	56.62
Zm00001d008874_P002	Maize	nucleus	56.63	56.38
Zm00001d039425_P003	Maize	nucleus	56.2	55.08
AT1G54610.1	Thale cress	nucleus	43.95	53.32
AT5G50860.1	Thale cress	nucleus	42.8	51.21
AT1G33770.1	Thale cress	nucleus	42.8	48.37
AT4G10010.2	Thale cress	nucleus	44.81	47.92
AT3G05050.1	Thale cress	nucleus, plastid	40.92	47.89
AT5G44290.3	Thale cress	nucleus	44.09	47.52
AT1G71530.1	Thale cress	plastid	44.38	47.02
AT1G09600.1	Thale cress	nucleus	47.98	46.64
AT1G57700.1	Thale cress	nucleus	46.11	46.24
AT4G22940.2	Thale cress	cytosol	36.46	45.18
AT1G03740.1	Thale cress	nucleus	45.39	42.57
AT5G39420.1	Thale cress	nucleus	38.18	41.15
AT1G74330.1	Thale cress	nucleus	41.21	40.92
AT1G18670.3	Thale cress	nucleus	42.36	40.83
AT5G10270.1	Thale cress	nucleus	29.54	40.59
AT5G64960.1	Thale cress	nucleus	28.82	38.99
AT3G01085.3	Thale cress	plastid	35.3	38.83

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EntrezGene:841739	UniProt:A0A178W394	ProteinID:AAF87863.1
ProteinID:AEE32884.1	ProteinID:ANM58757.1	ArrayExpress:AT1G53050	EnsemblPlantsGene:AT1G53050	RefSeq:AT1G53050	TAIR:AT1G53050
RefSeq:AT1G53050-TAIR-G	EnsemblPlants:AT1G53050.1	TAIR:AT1G53050.1	Unigene:At.16235	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
RefSeq:NP_001321170.1	RefSeq:NP_175713.1	ProteinID:OAP11813.1	PFAM:PF00069	PO:PO:0000005	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF204	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q9LNN0	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000A550A
SEG:seg	:	:	:	:	:

Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]

Coordinates

chr1:+:19771916..19775785

Molecular Weight (calculated)

77511.0 Da

IEP (calculated)

10.135

GRAVY (calculated)

-0.673

Length

694 amino acids

Sequence
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.