Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G64960.1 | Thale cress | nucleus | 91.29 | 89.86 |
| CDX69849 | Canola | nucleus | 88.71 | 88.02 |
| Bra009045.1-P | Field mustard | nucleus | 88.71 | 88.02 |
| CDX96988 | Canola | nucleus | 88.71 | 88.02 |
| VIT_07s0141g00280.t01 | Wine grape | cytosol | 41.39 | 84.27 |
| Zm00001d012392_P001 | Maize | cytosol | 33.47 | 82.84 |
| Solyc04g056280.2.1 | Tomato | nucleus | 77.62 | 76.56 |
| EES15089 | Sorghum | cytosol | 39.01 | 60.99 |
| Os08t0453800-00 | Rice | endoplasmic reticulum, plasma membrane | 35.45 | 55.94 |
| AT5G50860.1 | Thale cress | nucleus | 37.43 | 32.59 |
| AT1G54610.1 | Thale cress | nucleus | 35.64 | 31.47 |
| AT1G33770.1 | Thale cress | nucleus | 37.62 | 30.94 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 36.24 | 30.86 |
| AT4G22940.2 | Thale cress | cytosol | 34.06 | 30.71 |
| AT5G44290.3 | Thale cress | nucleus | 38.02 | 29.81 |
| AT1G53050.1 | Thale cress | nucleus, plastid | 40.59 | 29.54 |
| AT1G71530.1 | Thale cress | plastid | 37.82 | 29.16 |
| AT4G10010.2 | Thale cress | nucleus | 36.83 | 28.66 |
| AT5G39420.1 | Thale cress | nucleus | 34.85 | 27.33 |
| AT1G57700.1 | Thale cress | nucleus | 37.43 | 27.31 |
| AT1G74330.1 | Thale cress | nucleus | 37.62 | 27.18 |
| AT1G18670.3 | Thale cress | nucleus | 38.61 | 27.08 |
| AT3G01085.3 | Thale cress | plastid | 33.66 | 26.94 |
| AT1G09600.1 | Thale cress | nucleus | 37.03 | 26.19 |
| AT1G03740.1 | Thale cress | nucleus | 37.82 | 25.81 |
| Os01t0201000-01 | Rice | plasma membrane | 2.38 | 9.38 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.3 | MapMan:15.3.2.1.1 | MapMan:18.4.3.1.3 | Gene3D:3.30.200.20 | EntrezGene:830891 |
| UniProt:A0A178UJP9 | ProteinID:AED91515.1 | EMBL:AF375437 | ArrayExpress:AT5G10270 | EnsemblPlantsGene:AT5G10270 | RefSeq:AT5G10270 |
| TAIR:AT5G10270 | RefSeq:AT5G10270-TAIR-G | EnsemblPlants:AT5G10270.1 | TAIR:AT5G10270.1 | EMBL:AY120690 | Unigene:At.19998 |
| ProteinID:CAB96683.1 | Symbol:CDKC;1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004693 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007049 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008353 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0048366 | GO:GO:0051726 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | RefSeq:NP_196589.1 | ProteinID:OAO93760.1 | PFAM:PF00069 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF240 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| UniProt:Q9LFT8 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00000A5EBB | SEG:seg |
Description
CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
Coordinates
chr5:-:3221493..3224788
Molecular Weight (calculated)
56732.4 Da
IEP (calculated)
9.618
GRAVY (calculated)
-0.820
Length
505 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.