Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69849 | Canola | nucleus | 98.62 | 98.62 |
| AT5G10270.1 | Thale cress | nucleus | 88.02 | 88.71 |
| CDY31293 | Canola | nucleus | 85.46 | 83.98 |
| CDY33994 | Canola | nucleus | 85.27 | 83.95 |
| CDY72385 | Canola | cytosol | 27.31 | 82.74 |
| VIT_07s0141g00280.t01 | Wine grape | cytosol | 40.08 | 82.26 |
| CDY56227 | Canola | nucleus | 80.16 | 80.0 |
| Zm00001d012392_P001 | Maize | cytosol | 31.83 | 79.41 |
| CDY18101 | Canola | cytosol | 68.17 | 75.27 |
| Solyc04g056280.2.1 | Tomato | nucleus | 74.46 | 74.02 |
| CDY08835 | Canola | cytosol | 50.69 | 60.28 |
| EES15089 | Sorghum | cytosol | 37.52 | 59.13 |
| Os08t0453800-00 | Rice | endoplasmic reticulum, plasma membrane | 34.58 | 55.0 |
| CDX94278 | Canola | cytosol, mitochondrion, nucleus, plasma membrane | 27.11 | 50.0 |
| CDY14526 | Canola | cytosol | 67.39 | 47.77 |
| CDY54916 | Canola | mitochondrion | 25.34 | 39.09 |
| CDY71137 | Canola | plastid | 33.4 | 38.99 |
| CDY48795 | Canola | nucleus | 36.54 | 36.26 |
| CDX99109 | Canola | cytosol, mitochondrion, nucleus, plastid | 35.17 | 33.97 |
| CDY67158 | Canola | plastid | 37.13 | 33.39 |
| CDX95237 | Canola | nucleus | 36.94 | 32.92 |
| CDY18783 | Canola | plastid | 36.94 | 32.53 |
| CDY45813 | Canola | cytosol | 36.35 | 32.29 |
| CDX86178 | Canola | cytosol, nucleus, plastid | 35.76 | 32.21 |
| CDY53230 | Canola | nucleus, plastid | 36.94 | 32.19 |
| CDX80672 | Canola | cytosol, plastid | 36.15 | 32.17 |
| CDY10826 | Canola | nucleus | 33.6 | 32.02 |
| CDX71637 | Canola | cytosol | 36.15 | 31.72 |
| CDY05828 | Canola | cytosol | 36.15 | 31.67 |
| CDX99520 | Canola | nucleus | 37.72 | 31.27 |
| CDX84882 | Canola | cytosol | 36.54 | 31.26 |
| CDX86879 | Canola | nucleus | 37.72 | 31.12 |
| CDX93753 | Canola | nucleus | 38.11 | 31.09 |
| CDY15287 | Canola | nucleus | 37.72 | 31.07 |
| CDY58380 | Canola | nucleus | 35.76 | 31.06 |
| CDY27801 | Canola | cytosol | 35.36 | 30.87 |
| CDY70545 | Canola | nucleus | 37.92 | 30.83 |
| CDY70577 | Canola | nucleus | 37.92 | 30.83 |
| CDY02525 | Canola | plastid | 39.88 | 30.76 |
| CDY41930 | Canola | cytosol | 35.36 | 30.66 |
| CDY25738 | Canola | nucleus, plastid | 39.69 | 30.65 |
| CDY13111 | Canola | nucleus | 36.94 | 30.62 |
| CDY14916 | Canola | nucleus | 37.33 | 30.6 |
| CDX96330 | Canola | plastid | 38.11 | 30.5 |
| CDY66485 | Canola | nucleus | 37.33 | 30.5 |
| CDX68307 | Canola | plastid | 36.94 | 30.47 |
| CDY25881 | Canola | plastid | 40.27 | 30.06 |
| CDX72813 | Canola | plastid | 37.52 | 30.03 |
| CDY36688 | Canola | plastid | 36.35 | 29.98 |
| CDY60604 | Canola | nucleus | 37.33 | 29.87 |
| CDY33146 | Canola | nucleus | 37.33 | 29.73 |
| CDY20858 | Canola | nucleus | 37.33 | 29.73 |
| CDY03697 | Canola | nucleus, plastid | 37.52 | 29.43 |
| CDY50511 | Canola | nucleus, plastid | 39.88 | 29.38 |
| CDY67268 | Canola | nucleus, plastid | 37.33 | 29.23 |
| CDY41270 | Canola | cytosol | 31.83 | 28.77 |
| CDX73077 | Canola | cytosol | 35.36 | 28.17 |
| CDX96534 | Canola | cytosol | 35.36 | 28.17 |
| CDY53144 | Canola | nucleus | 37.13 | 28.17 |
| CDY31076 | Canola | nucleus | 34.58 | 27.85 |
| CDY39924 | Canola | nucleus | 36.15 | 27.75 |
| CDY29169 | Canola | nucleus | 36.15 | 27.75 |
| CDY31800 | Canola | nucleus | 36.94 | 27.69 |
| CDX81891 | Canola | plastid | 37.13 | 27.08 |
| CDY20686 | Canola | nucleus | 34.77 | 26.94 |
| CDX93496 | Canola | nucleus | 35.56 | 26.81 |
| CDX83825 | Canola | plastid | 36.94 | 26.78 |
| CDY34698 | Canola | plastid | 33.01 | 26.71 |
| CDX74282 | Canola | plastid | 32.61 | 26.65 |
| CDY55799 | Canola | plastid | 32.81 | 26.63 |
| CDY37004 | Canola | nucleus | 33.79 | 26.46 |
| CDX89871 | Canola | mitochondrion, nucleus | 36.35 | 25.59 |
| CDX96706 | Canola | nucleus | 36.94 | 25.37 |
| CDY18179 | Canola | nucleus | 36.35 | 24.9 |
| CDX74463 | Canola | nucleus | 28.29 | 23.45 |
| CDY22631 | Canola | mitochondrion | 36.74 | 22.45 |
| CDY06363 | Canola | mitochondrion | 36.54 | 22.28 |
| CDY50891 | Canola | nucleus, plastid | 36.15 | 19.23 |
| CDX67429 | Canola | cytosol, plastid | 33.79 | 18.53 |
| CDX91965 | Canola | nucleus | 32.42 | 15.93 |
| CDY37546 | Canola | nucleus | 32.61 | 15.87 |
| CDY43266 | Canola | nucleus | 30.26 | 14.43 |
| Os01t0201000-01 | Rice | plasma membrane | 2.36 | 9.38 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.3 | MapMan:15.3.2.1.1 | MapMan:18.4.3.1.3 | Gene3D:3.30.200.20 | GO:A0A078EC68 |
| EnsemblPlants:CDX96988 | ProteinID:CDX96988 | ProteinID:CDX96988.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00103936001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF240 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EDB269 | SEG:seg | : | : |
Description
BnaC09g46370D
Coordinates
chrLK031897:-:64224..67310
Molecular Weight (calculated)
57209.8 Da
IEP (calculated)
9.363
GRAVY (calculated)
-0.848
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVADAGKLN IEEHPPLWGS RSVDCFEKLE QIGEGTYGQV YMAKDIKTGE IVALKKIRMD NEKEGFPITA IREIKILKKL HHENVVELKE IVTSPGRDTD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTIPQ IKCYMRQLLT GLHYCHAHQI LHRDIKGSNL LIDNEGQLKL ADFGLARMYS QDHSGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLYAKPI LPGKNENEQL SKIFELCGSP DENNWPGVTK MPWFNNFKPS RPLKRRVREF FGQYQVFDRH
301: ALELLDKMLV LDPSQRITAK DALDAEYFWT DPLPCDPKSL PTYEASHEFQ TKKKRQEQRQ REEAAKRQKL QHPHQQHSRL PPLQHGGQSH AAAPHWPAHP
401: TNNAPPQVPA GPSHHYYGKP RGPPGPNRYP PSGNQSRGYN QSRGGYSSSG SYHQQGRGAP YAGGGPRGPN GGAYGVGPPN YTQGGQHGGS GRGQNPMGGS
501: RNQQYGWQQ
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTIPQ IKCYMRQLLT GLHYCHAHQI LHRDIKGSNL LIDNEGQLKL ADFGLARMYS QDHSGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLYAKPI LPGKNENEQL SKIFELCGSP DENNWPGVTK MPWFNNFKPS RPLKRRVREF FGQYQVFDRH
301: ALELLDKMLV LDPSQRITAK DALDAEYFWT DPLPCDPKSL PTYEASHEFQ TKKKRQEQRQ REEAAKRQKL QHPHQQHSRL PPLQHGGQSH AAAPHWPAHP
401: TNNAPPQVPA GPSHHYYGKP RGPPGPNRYP PSGNQSRGYN QSRGGYSSSG SYHQQGRGAP YAGGGPRGPN GGAYGVGPPN YTQGGQHGGS GRGQNPMGGS
501: RNQQYGWQQ
001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ
Arabidopsis Description
CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.