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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • nucleus 2
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040637.1-P Field mustard plastid 100.0 100.0
CDY53230 Canola nucleus, plastid 99.13 98.12
AT3G05050.1 Thale cress nucleus, plastid 85.99 83.81
CDY27801 Canola cytosol 83.39 82.68
CDY41930 Canola cytosol 83.05 81.77
CDX86178 Canola cytosol, nucleus, plastid 72.84 74.51
CDX80672 Canola cytosol, plastid 73.18 73.95
Os07t0668000-00 Rice cytosol, plasma membrane 3.63 67.74
TraesCS2D01G120200.1 Wheat nucleus 48.96 59.45
PGSC0003DMT400057839 Potato cytosol 58.82 59.03
Solyc01g098160.2.1 Tomato nucleus 58.48 58.78
CDY67158 Canola plastid 57.44 58.66
CDX94278 Canola cytosol, mitochondrion, nucleus, plasma membrane 27.85 58.33
KRG96918 Soybean cytosol 57.61 58.22
KRH34013 Soybean nucleus 58.3 58.1
Zm00001d047482_P001 Maize nucleus 55.02 58.03
CDX95237 Canola nucleus 57.09 57.79
TraesCS4B01G151800.1 Wheat nucleus 54.5 57.48
TraesCS4D01G151100.1 Wheat nucleus 54.67 57.04
OQU92600 Sorghum nucleus 55.54 56.91
KRG92786 Soybean nucleus 57.09 56.9
Zm00001d029143_P003 Maize nucleus 53.81 56.86
KRH68662 Soybean nucleus 58.13 56.76
Zm00001d007111_P001 Maize plastid 56.23 56.72
TraesCS2A01G119300.1 Wheat nucleus 55.54 56.71
TraesCS4A01G142300.1 Wheat nucleus 54.15 56.5
Zm00001d022499_P001 Maize plastid 55.71 56.39
VIT_14s0030g01260.t01 Wine grape cytosol, nucleus, plastid 56.75 56.36
KXG36890 Sorghum plastid 55.54 56.12
TraesCS2B01G139000.1 Wheat nucleus 55.36 56.04
CDY71137 Canola plastid 38.93 51.61
HORVU4Hr1G048510.1 Barley cytosol 48.27 50.36
CDY54916 Canola mitochondrion 28.03 49.09
CDY45813 Canola cytosol 48.27 48.69
HORVU2Hr1G020680.2 Barley cytosol 41.35 48.68
CDY05828 Canola cytosol 48.27 48.02
CDX71637 Canola cytosol 47.58 47.41
CDX84882 Canola cytosol 48.62 47.23
CDY72385 Canola cytosol 13.32 45.83
CDX99109 Canola cytosol, mitochondrion, nucleus, plastid 40.83 44.78
CDY48795 Canola nucleus 38.75 43.66
CDY25738 Canola nucleus, plastid 49.31 43.25
CDY02525 Canola plastid 49.13 43.03
CDY25881 Canola plastid 48.96 41.5
CDX99520 Canola nucleus 43.94 41.37
CDY58380 Canola nucleus 41.87 41.3
CDX86879 Canola nucleus 43.94 41.17
CDX68307 Canola plastid 43.6 40.84
CDY50511 Canola nucleus, plastid 48.79 40.81
CDY15287 Canola nucleus 43.6 40.78
CDY36688 Canola plastid 43.43 40.68
CDX93753 Canola nucleus 43.77 40.54
CDY31076 Canola nucleus 44.29 40.51
CDY70577 Canola nucleus 43.77 40.42
CDX96330 Canola plastid 44.46 40.41
CDY70545 Canola nucleus 43.6 40.26
CDX72813 Canola plastid 44.12 40.09
CDY13111 Canola nucleus 42.56 40.07
CDY03697 Canola nucleus, plastid 44.81 39.91
CDY53144 Canola nucleus 46.19 39.79
CDY10826 Canola nucleus 36.68 39.7
CDY67268 Canola nucleus, plastid 44.46 39.54
CDY31800 Canola nucleus 46.37 39.47
CDY14916 Canola nucleus 42.21 39.29
CDY20686 Canola nucleus 44.64 39.27
CDY66485 Canola nucleus 42.21 39.17
CDY39924 Canola nucleus 44.81 39.06
CDY29169 Canola nucleus 44.81 39.06
CDY60604 Canola nucleus 42.73 38.84
CDY20858 Canola nucleus 42.56 38.5
CDY33146 Canola nucleus 42.56 38.5
CDX93496 Canola nucleus 44.81 38.37
CDY08835 Canola cytosol 28.03 37.85
CDX73077 Canola cytosol 41.0 37.09
CDX96988 Canola nucleus 32.53 36.94
CDX96534 Canola cytosol 40.83 36.93
CDX69849 Canola nucleus 32.35 36.74
CDX74282 Canola plastid 38.93 36.12
CDY56227 Canola nucleus 31.83 36.08
CDY55799 Canola plastid 39.1 36.04
CDY33994 Canola nucleus 32.18 35.98
CDY34698 Canola plastid 39.1 35.93
CDY31293 Canola nucleus 32.18 35.91
CDX81891 Canola plastid 43.08 35.67
CDY37004 Canola nucleus 39.97 35.54
CDX89871 Canola mitochondrion, nucleus 43.43 34.72
CDX83825 Canola plastid 42.04 34.62
CDY18101 Canola cytosol 27.51 34.49
CDY18179 Canola nucleus 43.08 33.51
CDY41270 Canola cytosol 32.53 33.39
CDX96706 Canola nucleus 42.21 32.93
CDX74463 Canola nucleus 34.26 32.25
CDY06363 Canola mitochondrion 44.64 30.9
CDY22631 Canola mitochondrion 44.12 30.61
CDY50891 Canola nucleus, plastid 44.46 26.85
CDX67429 Canola cytosol, plastid 39.79 24.78
CDY14526 Canola cytosol 29.76 23.96
CDX91965 Canola nucleus 40.14 22.39
CDY37546 Canola nucleus 40.31 22.28
CDY43266 Canola nucleus 37.2 20.15
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.1.8Gene3D:3.30.200.20GO:A0A078G297UniProt:A0A078G297EnsemblPlants:CDY18783
ProteinID:CDY18783ProteinID:CDY18783.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00005943001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24056
PANTHER:PTHR24056:SF319InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI000253E6F0SEG:seg::::
Description
BnaAnng02480DBnaAnng02480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G297]
Coordinates
chrLK032089:+:103322..106395
Molecular Weight (calculated)
65444.4 Da
IEP (calculated)
10.394
GRAVY (calculated)
-0.677
Length
578 amino acids
Sequence
(BLAST)
001: MGCVLGRPGS PGSVVSSRIE SNRKEVNNVS VTKTETIQTT SVVVASASTS EEVVKNHKEE NGTRERKPRG ERRRSSKPDP RRSNPPKNLL GEQVAAGWPP
101: WLSEVCGEAL NGWLPRKADS FEKIEKIGSG TYSNVYKARD SLTGSIVALK KVRCDVLERE SLRFMAREIL ILRRLDHPNV IKLEGLVTSR MSNSLYLVFR
201: YMHHDLAGLA ASPDITFTEQ QVKCYMKQLL SGLEHCHNRG VLHRDIKGSN LLIDDGGVLR IGDFGLATFY DSTKRQRMTN RVVTLWYRAP ELLHGVEEYN
301: VGIDLWSAGC ILAELLSGRP IMPGRNEVEQ LHRIYKLCGS PSEEYWRKIR LPSHQRHAHH KPLPQFKRKV REVFKDFSPQ ALSLLDTLLA IDPSERQTAS
401: DALMSDFFMT KPFPCEPSDL PKYPPSKEID ARKRDEEFRR QREARKVQGE SRRRIRLPRE RAHPRAMAAP EANAENQSNI DRMRMITHAN AKSKSEKFPP
501: PHQDGALGFQ VGSSRRLDPS EIPFSSNSFT ASYSKEPLQT WSGPLAPIGA SDSSSQRRKD VNKERRMAAK LKGKRIVV
Best Arabidopsis Sequence Match ( AT3G05050.1 )
(BLAST)
001: MGCVLGRPGS SGSVSGSRDE VSTRIESNRH QVNNVSVTKT ETTESTSAVV VASASNGEEV RNHEDVVDQK KENGFVVTEA KERKSKGERK RSKPPDPRRS
101: NPPKNLLGEQ VAAGWPSWLS EVCGEALSGW LPRKADSFEK IDKIGSGTYS NVYKAKDSLT GNIVALKKVR CDVNERESLK FMAREILILR RLDHPNVIKL
201: EGLVTSRMSS SLYLVFRYMD HDLAGLAASP EIKFTEQQVK CYMKQLLSGL EHCHNRGVLH RDIKGSNLLI DDGGVLRIGD FGLATFFDAS KRQEMTNRVV
301: TLWYRSPELL HGVVEYSVGV DLWSAGCILA ELLAGRAIMP GRNEVEQLHR IYKLCGSPSE EYWKKIRLPS THKHAHHKPL PQYKRRIREV YKDFSPEALS
401: LLDTLLALDP AERQTATDVL MSDFFTTEPL ACQPSDLPKY PPSKEIDAKR RDEEYRRQRE ARKAQGESGR RMRPRERAPR AMPAPEANAE NQSNIDRMRM
501: ITHANAKSKS EKFPPPHQDG SLGFQVGSSR RLDPSEIPYS TNSFTSSYSK EPFQTWSGPL APIGAPDSTT RRRNDINKER RMASKVKGKR IVV
Arabidopsis Description
At3g05050/T12H1_1 [Source:UniProtKB/TrEMBL;Acc:Q9MAB4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.