Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G151800.1 | Wheat | nucleus | 98.19 | 99.27 |
| TraesCS4A01G142300.1 | Wheat | nucleus | 97.83 | 97.83 |
| Zm00001d047482_P001 | Maize | nucleus | 87.0 | 87.96 |
| Zm00001d029143_P003 | Maize | nucleus | 85.74 | 86.84 |
| OQU92600 | Sorghum | nucleus | 87.91 | 86.35 |
| TraesCS2D01G120200.1 | Wheat | nucleus | 69.68 | 81.09 |
| HORVU4Hr1G048510.1 | Barley | cytosol | 80.69 | 80.69 |
| Solyc01g098160.2.1 | Tomato | nucleus | 68.23 | 65.74 |
| PGSC0003DMT400057839 | Potato | cytosol | 68.23 | 65.62 |
| KRG96918 | Soybean | cytosol | 66.25 | 64.16 |
| VIT_14s0030g01260.t01 | Wine grape | cytosol, nucleus, plastid | 66.06 | 62.89 |
| KRH34013 | Soybean | nucleus | 65.7 | 62.76 |
| Bra027966.1-P | Field mustard | nucleus | 63.36 | 62.34 |
| CDY67158 | Canola | plastid | 63.54 | 62.19 |
| CDX95237 | Canola | nucleus | 63.9 | 62.0 |
| KRH68662 | Soybean | nucleus | 66.25 | 61.99 |
| AT1G54610.1 | Thale cress | nucleus | 63.9 | 61.89 |
| KRG92786 | Soybean | nucleus | 64.26 | 61.38 |
| Bra040637.1-P | Field mustard | plastid | 57.04 | 54.67 |
| CDY18783 | Canola | plastid | 57.04 | 54.67 |
| CDX86178 | Canola | cytosol, nucleus, plastid | 55.6 | 54.51 |
| Bra009977.1-P | Field mustard | cytosol, nucleus, plastid | 55.6 | 54.51 |
| CDX80672 | Canola | cytosol, plastid | 55.78 | 54.02 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 57.76 | 53.96 |
| CDY53230 | Canola | nucleus, plastid | 56.68 | 53.77 |
| Bra039466.1-P | Field mustard | plastid | 54.87 | 52.14 |
| CDY27801 | Canola | cytosol | 54.87 | 52.14 |
| CDY41930 | Canola | cytosol | 55.05 | 51.96 |
| TraesCS3D01G141000.1 | Wheat | cytosol | 59.03 | 47.74 |
| TraesCS3D01G432000.1 | Wheat | plasma membrane | 45.13 | 44.96 |
| TraesCS5D01G118300.1 | Wheat | endoplasmic reticulum, plasma membrane | 50.36 | 42.86 |
| TraesCS6D01G184000.1 | Wheat | cytosol, nucleus, peroxisome | 51.99 | 41.5 |
| TraesCS7D01G316100.1 | Wheat | nucleus | 55.6 | 41.45 |
| TraesCS2D01G190600.1 | Wheat | plastid | 50.72 | 40.61 |
| TraesCS4D01G086800.1 | Wheat | mitochondrion | 45.67 | 39.97 |
| TraesCS7D01G435700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 40.25 | 38.92 |
| TraesCS1D01G243300.1 | Wheat | nucleus | 34.48 | 37.3 |
| TraesCS5D01G088700.2 | Wheat | nucleus, plastid | 46.57 | 35.98 |
| TraesCS5D01G118400.1 | Wheat | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF176 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS4D01G151100 | EnsemblPlants:TraesCS4D01G151100.1 | TIGR:cd07840 | SEG:seg | : |
Description
No Description!
Coordinates
chr4D:+:173572528..173577493
Molecular Weight (calculated)
61160.7 Da
IEP (calculated)
10.040
GRAVY (calculated)
-0.633
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVHGRPSA VPTPDRPPPE PKPEQAPPQE GDKGDQPAPV PAPAEKPARK ERRSRSSRSV AEARLGGSFA NRARGEQVAA GWPAWLSAVA GEAIDGWTPR
101: RADSFEKIDK IGQGTYSNVY KARDTVSGKI VALKKVRFDN LEPESVRFMA REILILRRLD HPSVIKIDGL VTSRMSCSLY LVFEYMEHDL AGLVASPDIK
201: FTEPQVKCYM NQLLSGLEHC HDRGVLHRDI KGSNLLLDNN GMLKIADFGL ASFFDPSRKQ PMTSRVVTLW YRPPELLLGA TDYGVGVDLW SAGCILAELL
301: AGRPIMPGRT EVEQLHKIFK LCGSPTEEYW KKSKLPHATI FKPQQPYKRR ITDTFKDFPQ SALRLIETLL AIDPADRLTA SSALRSDFFT TEPYACEPSS
401: LPKYPPSKEM DAKRRDEEAR RSRAAGGRPN GDGASKARTR DRPRGAAAPE ANAELQVNID KRRIASHANA KSKSEKFPPP HQDGAVGFPL GSSNQMDPLY
501: EPPDPTSFST VFSHEKSSVP TWSGPLVNSS AVGNQKRKHK SSRSSKQPST ARAR
101: RADSFEKIDK IGQGTYSNVY KARDTVSGKI VALKKVRFDN LEPESVRFMA REILILRRLD HPSVIKIDGL VTSRMSCSLY LVFEYMEHDL AGLVASPDIK
201: FTEPQVKCYM NQLLSGLEHC HDRGVLHRDI KGSNLLLDNN GMLKIADFGL ASFFDPSRKQ PMTSRVVTLW YRPPELLLGA TDYGVGVDLW SAGCILAELL
301: AGRPIMPGRT EVEQLHKIFK LCGSPTEEYW KKSKLPHATI FKPQQPYKRR ITDTFKDFPQ SALRLIETLL AIDPADRLTA SSALRSDFFT TEPYACEPSS
401: LPKYPPSKEM DAKRRDEEAR RSRAAGGRPN GDGASKARTR DRPRGAAAPE ANAELQVNID KRRIASHANA KSKSEKFPPP HQDGAVGFPL GSSNQMDPLY
501: EPPDPTSFST VFSHEKSSVP TWSGPLVNSS AVGNQKRKHK SSRSSKQPST ARAR
001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
Arabidopsis Description
Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.