Factsheet for TraesCS5D01G088700.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

cytosol 1
plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G075200.1	Wheat	nucleus	89.26	94.67
TraesCS5B01G081500.1	Wheat	nucleus	88.01	93.21
HORVU5Hr1G020060.7	Barley	nucleus	86.75	91.34
KXG23797	Sorghum	plastid	63.18	64.44
Zm00001d000147_P006	Maize	nucleus, plastid	62.9	61.19
Zm00001d041514_P002	Maize	plastid	62.34	61.15
Os12t0577700-00	Rice	plasma membrane	58.72	56.89
TraesCS2D01G120200.1	Wheat	nucleus	31.24	47.06
TraesCS4D01G151100.1	Wheat	nucleus	35.98	46.57
TraesCS2D01G190600.1	Wheat	plastid	43.51	45.09
TraesCS3D01G141000.1	Wheat	cytosol	38.49	40.29
TraesCS3D01G432000.1	Wheat	plasma membrane	30.82	39.75
TraesCS4D01G086800.1	Wheat	mitochondrion	32.91	37.28
TraesCS7D01G435700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	29.71	37.17
TraesCS6D01G184000.1	Wheat	cytosol, nucleus, peroxisome	35.84	37.03
TraesCS5D01G118300.1	Wheat	endoplasmic reticulum, plasma membrane	33.05	36.41
TraesCS7D01G316100.1	Wheat	nucleus	36.54	35.26
TraesCS1D01G243300.1	Wheat	nucleus	24.41	34.18
TraesCS5D01G118400.1	Wheat	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5D01G088700	EnsemblPlants:TraesCS5D01G088700.2	TIGR:cd07840	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:+:95273562..95276024

Molecular Weight (calculated)

78172.2 Da

IEP (calculated)

8.914

GRAVY (calculated)

-0.507

Length

717 amino acids

Sequence
(BLAST)

001: MGCAVSKGAS LGSPGYEVSS ASGHEVVSGS ASASASAAVW SRPRDGEGDE DKGAARGNAV GGTARPGNLH RYIECEQVAA GWPAWLSAVA AEAVQGWVPL
101: KAENFEKLEK IGQGTYSSVF RARSLETGRL VALKKVRFDS VEPESVRFMA REIIVLRRLQ GHPNVIGLHG LITSRSSACI YLVFEYMEHD LAGLASSPDL
201: SFSEPQIKCY MRQLLAGLEH CHARGVMHRD IKCANLLVSS DGVLKVADFG LANVFSTSPT QQPLTSRVVT LWYRPPELLL GATAYDPSVD LWSAGCVFAE
301: LHARRPVLQG RTEVEQIHKI FKLCGSPPDA YWHRAGMTSN ASVFRPQAPY ESRLAETFGS AMPDAAFRLL GALLSVEPAA RGTASTALAS DYFSTEPYAC
401: EPSSLPKCAP NKEMDAKFRE DSRRRNNAPP PAKRLSRAHK SMQDTSQRHH SHVHAEESLP MEVDGGLRPE PATVSNDAPQ PEPPCTRQMP GSCQEEEDAP
501: APAPARLPDH LALSGGPVQL AASTGFAWAK KPRVPDAATT KRSASRGPRS TTTHGGDAAS ARTTAGATTG PYEAEKQEMI KQWAQVAEAF TSSEAYNSRS
601: TREPLDAKQL KTSKKHKGKM QRVDYSGPLL SETRRVDEFL QSHEQRIRRA GRRRSWFHKG DRSNTPHNEM HACRLTNSSE TAIANLILLL FVDRTKEGAA
701: ALRLRPRERH ARHDHTC

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.