Factsheet for TraesCS1D01G243300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G243300.1	Wheat	nucleus	99.8	99.61
TraesCS1B01G254800.1	Wheat	nucleus	99.41	99.61
HORVU1Hr1G056380.1	Barley	nucleus	99.02	99.02
HORVU1Hr1G056390.2	Barley	plastid	88.09	88.26
Os05t0389700-01	Rice	nucleus	86.13	84.97
GSMUA_Achr5P05370_001	Banana	nucleus	82.42	81.78
EES18167	Sorghum	nucleus	82.23	81.59
PGSC0003DMT400015241	Potato	nucleus	75.2	76.09
KRH73489	Soybean	nucleus	76.17	75.58
KRH14656	Soybean	nucleus	75.98	75.39
Solyc06g073630.2.1	Tomato	nucleus	74.41	75.3
KRG89779	Soybean	nucleus	76.17	75.0
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	53.52	58.92
TraesCS2D01G120200.1	Wheat	nucleus	36.33	39.08
TraesCS4D01G151100.1	Wheat	nucleus	37.3	34.48
TraesCS3D01G432000.1	Wheat	plasma membrane	35.16	32.37
TraesCS3D01G141000.1	Wheat	cytosol	39.84	29.78
TraesCS5D01G118300.1	Wheat	endoplasmic reticulum, plasma membrane	37.5	29.49
TraesCS6D01G184000.1	Wheat	cytosol, nucleus, peroxisome	39.65	29.25
TraesCS4D01G086800.1	Wheat	mitochondrion	34.18	27.65
TraesCS7D01G316100.1	Wheat	nucleus	38.48	26.51
TraesCS2D01G190600.1	Wheat	plastid	35.74	26.45
TraesCS7D01G435700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	28.71	25.65
TraesCS5D01G088700.2	Wheat	nucleus, plastid	34.18	24.41
TraesCS5D01G118400.1	Wheat	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1D01G243300	EnsemblPlants:TraesCS1D01G243300.1	TIGR:cd07840	SEG:seg

Description

No Description!

Coordinates

chr1D:+:333496241..333500204

Molecular Weight (calculated)

56743.3 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.858

Length

512 amino acids

Sequence
(BLAST)

001: MATAAPGQLN LDDYPSWGSR GVDCFEKLEQ IGEGTYGQVF MAKETETKEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIQLKEI VTSPGPDRDE
101: QGKQIDGNKY KGSIYMVFEY MDHDLTGLAD KPGMRFTIPQ IKCYMKQLLT GLHYCHINQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNANLTNR
201: VITLWYRPPE LLLGSTKYGP AVDMWSVGCI FAELLNGKPI LPGKNEPDQL TKIFELCGTP DELIWPGVTK MPWYNNLKPP RQLKRHVKDA FKHFDFHALD
301: LLERMLTLDP SKRISANEAL DSEYFWTDPL PCDPKSLPKY EASHEYQTKK RRQQQRQADD AAAKRQKTHH SQPPHARLPP IQQSGHQIRP AQPTNNPHPP
401: MASGSNHHYG KPRGPGGPNR YPPGGNQGGG GYPNRGGQGG GYGSGPYPPQ QGRGPPPYPG GGPRGGGSSG GYGGAPNFPQ AGPYGPGGPG RGPNYPPQAG
501: SRNQQQQYGN WQ

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.