Factsheet for TraesCS1B01G254800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G243300.1	Wheat	nucleus	99.8	99.42
TraesCS1D01G243300.1	Wheat	nucleus	99.61	99.41
HORVU1Hr1G056380.1	Barley	nucleus	99.02	98.83
HORVU1Hr1G056390.2	Barley	plastid	88.06	88.06
TraesCS3B01G561200.1	Wheat	nucleus	86.11	86.78
Os05t0389700-01	Rice	nucleus	86.69	85.36
GSMUA_Achr5P05370_001	Banana	nucleus	82.97	82.17
EES18167	Sorghum	nucleus	82.58	81.78
PGSC0003DMT400015241	Potato	nucleus	75.34	76.09
KRH73489	Soybean	nucleus	76.52	75.78
KRH14656	Soybean	nucleus	76.32	75.58
Solyc06g073630.2.1	Tomato	nucleus	74.56	75.3
KRG89779	Soybean	nucleus	76.52	75.19
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	53.82	59.14
TraesCS4B01G151800.1	Wheat	nucleus	37.38	34.85
TraesCS2B01G139000.1	Wheat	nucleus	37.77	33.8
TraesCS3B01G473100.1	Wheat	cytosol, plasma membrane, plastid	35.23	32.26
TraesCS3B01G158600.1	Wheat	cytosol	40.12	29.93
TraesCS6B01G231200.2	Wheat	cytosol	39.73	29.12
TraesCS7B01G220500.1	Wheat	nucleus	38.36	26.38
TraesCS2B01G209300.1	Wheat	plastid	35.62	26.3
TraesCS5B01G081500.1	Wheat	nucleus	34.83	26.29
TraesCS7B01G345800.1	Wheat	nucleus	28.96	26.01
TraesCS4B01G089100.3	Wheat	mitochondrion	34.83	25.83
TraesCS5B01G110400.1	Wheat	nucleus	15.26	24.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1B01G254800	EnsemblPlants:TraesCS1B01G254800.1	TIGR:cd07840	SEG:seg

Description

No Description!

Coordinates

chr1B:+:449387456..449391441

Molecular Weight (calculated)

56599.1 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.852

Length

511 amino acids

Sequence
(BLAST)

001: MATAAPGQLN LDDYPSWGSR GVDCFEKLEQ IGEGTYGQVF MAKETETKEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIQLKEI VTSPGPDRDE
101: QGKQIDGNKY KGSIYMVFEY MDHDLTGLAD KPGMRFTIPQ IKCYMKQLLT GLHYCHINQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNANLTNR
201: VITLWYRPPE LLLGSTKYGP AVDMWSVGCI FAELLNGKPI LPGKNEPDQL TKIFELCGTP DELIWPGVTK MPWYNNLKPP RQLKRHVKDA FKHFDFHALD
301: LLERMLTLDP SKRISANEAL DSEYFWTDPL PCDPKSLPKY EASHEYQTKK RRQQQRQADD AAAKRQKTHH PQPPHARLPP IQQSGHQIRP AQPTNNPHPP
401: MASGSGHHYG KPRGPGGPNR YPPGGNQGGG GYPNRGGQGG GYGSGPYPQQ GRGPPPYPGG GPRGGGSSGG YGGAPNFPQA GPYGPGGPGR GPNYPPQAGS
501: RNQQQQYGNW Q

Best Arabidopsis Sequence Match ( AT5G64960.1 )
(BLAST)

001: MAAAAFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIHLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLNGKPI LPGKTENEQL NKIYELCGSP DESNWPGVSK MPWYNQMKSS RPLKRRVREI YRHFDRHALE
301: LLEKMLVLDP SQRICAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQMRHNEE AAKKQKLQHP QQQHSRLPPQ QHGVGQSHAA PLWPAGPNHP
401: MNNNAPPPQI PAGGHYYGGK PRGGAPVPNR YPPSGNQTGG YNNQSRGGYS SGAYPPQGRG APYGAGPRGP SGGYGVGPPN YSQGGGQYGG SGGSGRGQNP
501: MGGARNQQYG WQP

Arabidopsis Description

CDKC-2Cyclin-dependent kinase C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.