Factsheet for GSMUA_Achr5P05370_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0958000-01	Rice	plasma membrane	88.95	89.47
EER93534	Sorghum	cytosol	87.21	87.89
Zm00001d033847_P003	Maize	nucleus	86.63	87.65
VIT_06s0009g01800.t01	Wine grape	nucleus	86.82	86.65
Os05t0389700-01	Rice	nucleus	86.05	85.55
TraesCSU01G058100.1	Wheat	nucleus	83.91	85.4
TraesCS3B01G561200.1	Wheat	nucleus	83.72	85.21
TraesCS3A01G498200.1	Wheat	nucleus	83.72	85.21
KRG89779	Soybean	nucleus	85.27	84.62
Zm00001d013371_P001	Maize	nucleus	86.43	84.47
KRH14656	Soybean	nucleus	83.14	83.14
KRH73489	Soybean	nucleus	83.14	83.14
TraesCS1B01G254800.1	Wheat	nucleus	82.17	82.97
TraesCS1A01G243300.1	Wheat	nucleus	81.98	82.46
TraesCS1D01G243300.1	Wheat	nucleus	81.78	82.42
PGSC0003DMT400015241	Potato	nucleus	80.81	82.41
HORVU1Hr1G056380.1	Barley	nucleus	81.59	82.23
Solyc06g073630.2.1	Tomato	nucleus	80.62	82.21
EES18167	Sorghum	nucleus	81.78	81.78
HORVU3Hr1G110150.3	Barley	plastid	83.72	77.84
HORVU1Hr1G056390.2	Barley	plastid	72.09	72.8
GSMUA_Achr6P20270_001	Banana	plastid	31.59	39.28
GSMUA_Achr6P02960_001	Banana	cytosol	27.13	39.0
GSMUA_Achr10P...	Banana	cytosol	34.88	36.22
GSMUA_Achr6P07970_001	Banana	plastid	37.21	35.62
GSMUA_Achr5P26940_001	Banana	nucleus	39.53	34.46
GSMUA_Achr6P07440_001	Banana	cytosol	40.31	33.33
GSMUA_Achr11P...	Banana	plastid	38.76	33.22
GSMUA_Achr11P...	Banana	plastid	38.57	32.95
GSMUA_Achr6P28920_001	Banana	plastid	40.31	31.33
GSMUA_Achr2P02360_001	Banana	plastid	37.21	29.91
GSMUA_Achr5P16890_001	Banana	nucleus	39.73	29.67
GSMUA_Achr4P28060_001	Banana	nucleus	38.57	29.57
GSMUA_Achr8P08480_001	Banana	nucleus	37.79	29.5
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	37.4	29.15
GSMUA_Achr6P24660_001	Banana	nucleus	36.63	28.99
GSMUA_Achr2P05620_001	Banana	cytosol	37.79	28.97
GSMUA_Achr2P13490_001	Banana	nucleus	35.85	28.42
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	36.24	28.16
GSMUA_Achr10P...	Banana	nucleus	40.7	27.96
GSMUA_Achr4P03350_001	Banana	nucleus	35.66	27.59
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	36.43	26.9
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	31.98	23.84
GSMUA_Achr6P17460_001	Banana	cytosol	39.53	21.68
GSMUA_Achr9P08070_001	Banana	nucleus	38.57	20.99

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G05370_001	EnsemblPlants:GSMUA_Achr5P05370_001	EnsemblPlants:GSMUA_Achr5T05370_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0SVW6	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002948130	SEG:seg	:	:	:	:

Description

Cyclin-dependent kinase C-2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05370_001]

Coordinates

chr5:-:3970120..3976321

Molecular Weight (calculated)

57136.8 Da

IEP (calculated)

9.690

GRAVY (calculated)

-0.859

Length

516 amino acids

Sequence
(BLAST)

001: MAVAASGQLN LEETPSWGSR SVDCFEKLEQ IGEGTYGQVY MARETRTGEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIQLKEI VTSPGPEKDE
101: QGKPDGNKYK GSIYMVFEYM DHDLTGLSDR PGMRFTVPQI KCYMRQLLTG LHYCHVNQVL HRDIKGSNLL IDNEGNLKLA DFGLARSFSS DHNGNLTNRV
201: ITLWYRPPEL LLGATKYGPA VDMWSVGCIF AELLHGKPIL PGKNEPEQLS KIFELCGTPD EVNWPGVSKM PWYNNFKPSR PIKRRVRETF KHFDRHALEL
301: LERMLTLDPS QRVSAKDALD AEYFWTDPLP CDPKSLPKYE SSHEFQTKKK RQQQRQQEET AKRQKLQHPQ PHARLPPIQQ TGQPHPQIRP GPSQPIHNAP
401: PPMAAGPGHH YGKPRGPSGG PNRYPQGGNP SGGYNPNRGG QGGGYNSGPY SQPGRGPPPY AGGGMPGSGG PRGGSGSGYG VNAPNYPQGG PYGASGAGRG
501: PNMSGNRNQQ QYGGWQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.