Factsheet for GSMUA_Achr6P02960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59494	Soybean	nucleus	55.15	47.48
VIT_18s0072g00140.t01	Wine grape	cytosol	54.6	46.34
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	56.55	42.92
KRH64126	Soybean	nucleus	56.27	40.4
PGSC0003DMT400050723	Potato	cytosol	51.81	40.35
KRH53817	Soybean	nucleus	55.15	40.24
GSMUA_Achr6P20270_001	Banana	plastid	46.24	40.0
Solyc04g051460.2.1	Tomato	cytosol	51.53	39.19
Solyc04g071920.1.1	Tomato	nucleus	58.5	36.91
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	58.22	36.1
GSMUA_Achr10P...	Banana	cytosol	48.47	35.01
TraesCS7B01G345800.1	Wheat	nucleus	55.15	34.8
TraesCS7D01G435700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	55.43	34.73
KRH35103	Soybean	nucleus	57.94	34.49
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	57.1	34.28
Os02t0304500-00	Rice	plastid	48.75	33.59
GSMUA_Achr6P07970_001	Banana	plastid	49.3	32.84
EER88844	Sorghum	vacuole	49.3	31.16
GSMUA_Achr11P...	Banana	plastid	52.37	31.13
GSMUA_Achr5P26940_001	Banana	nucleus	50.7	30.74
GSMUA_Achr6P07440_001	Banana	cytosol	51.81	29.81
GSMUA_Achr11P...	Banana	plastid	49.58	29.57
GSMUA_Achr2P02360_001	Banana	plastid	51.25	28.66
OQU76929	Sorghum	nucleus	58.22	28.63
GSMUA_Achr5P05370_001	Banana	nucleus	39.0	27.13
GSMUA_Achr6P28920_001	Banana	plastid	49.86	26.96
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	49.03	26.59
GSMUA_Achr5P16890_001	Banana	nucleus	50.97	26.48
GSMUA_Achr8P08480_001	Banana	nucleus	48.75	26.48
GSMUA_Achr2P05620_001	Banana	cytosol	49.58	26.45
GSMUA_Achr4P03350_001	Banana	nucleus	47.35	25.49
GSMUA_Achr6P24660_001	Banana	nucleus	45.96	25.31
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	46.24	25.0
GSMUA_Achr10P...	Banana	nucleus	51.25	24.5
GSMUA_Achr2P13490_001	Banana	nucleus	43.73	24.12
GSMUA_Achr4P28060_001	Banana	nucleus	44.85	23.92
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	45.68	23.46
GSMUA_Achr8P00590_001	Banana	cytosol, mitochondrion, nucleus, plastid	43.45	22.54
GSMUA_Achr9P08070_001	Banana	nucleus	51.81	19.62
GSMUA_Achr6P17460_001	Banana	cytosol	50.7	19.34

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G02960_001
EnsemblPlants:GSMUA_Achr6P02960_001	EnsemblPlants:GSMUA_Achr6T02960_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T3P4	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF221	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295C91C	SEG:seg	:

Description

Probable serine/threonine-protein kinase At1g54610 [Source:GMGC_GENE;Acc:GSMUA_Achr6G02960_001]

Coordinates

chr6:-:2026876..2035228

Molecular Weight (calculated)

40356.5 Da

IEP (calculated)

9.131

GRAVY (calculated)

-0.419

Length

359 amino acids

Sequence
(BLAST)

001: MAREIMILQK LDHPNVIKLE GLATSRMHYS LYLVFDYMRS DLARVISRSD ARLTEPQVKC YMRQILSGLQ HCHERGILHR DIKGSNLLID KNGVLKIADF
101: GLANFYNPNK KCSLTSRVVT LWYRAPELLL GTTDYGVGID LWSAGCLLAE MFVGKPIMPG RNEVEQLYKI FKLCGSPSED YWRKLKLATI FQPPPPYKPS
201: IVETFGDFSS SALNLLMVLL ALDPSNRGTA ASALQSDFFS TRPSACDLSD LPVMYKEADE PIQLYERRKR NASSKQQSRR QRDGERKLVT VNTKSDSGSS
301: KEEKPTDLLT DSQEPGSSTG SSSSSIKAEG STPIQRESQR TRLPDIITIP KRCICYNNS

Best Arabidopsis Sequence Match ( AT1G53050.2 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.