Factsheet for PGSC0003DMT400050723

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g051460.2.1	Tomato	cytosol	94.36	92.16
GSMUA_Achr6P02960_001	Banana	cytosol	40.35	51.81
PGSC0003DMT400073963	Potato	cytosol	29.93	51.69
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	58.57	46.63
KRH53817	Soybean	nucleus	49.67	46.54
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	59.0	45.48
KRH64126	Soybean	nucleus	49.24	45.4
Os02t0304500-00	Rice	plastid	49.02	43.38
KRH59494	Soybean	nucleus	38.61	42.69
TraesCS7B01G345800.1	Wheat	nucleus	51.63	41.83
TraesCS7D01G435700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	51.63	41.54
PGSC0003DMT400011092	Potato	cytosol	47.07	38.27
PGSC0003DMT400057839	Potato	cytosol	46.42	37.15
PGSC0003DMT400027661	Potato	nucleus	46.85	36.73
PGSC0003DMT400073941	Potato	cytosol	44.9	36.57
EER88844	Sorghum	vacuole	44.25	35.92
PGSC0003DMT400083223	Potato	cytosol	47.72	34.54
OQU76929	Sorghum	nucleus	53.8	33.97
PGSC0003DMT400071458	Potato	nucleus	47.07	33.7
PGSC0003DMT400040754	Potato	cytosol	38.39	32.9
PGSC0003DMT400003634	Potato	plastid	46.2	32.13
PGSC0003DMT400034197	Potato	nucleus	46.64	31.9
PGSC0003DMT400032406	Potato	nucleus	49.02	31.17
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	43.82	31.08
PGSC0003DMT400076796	Potato	nucleus	45.34	30.83
PGSC0003DMT400063133	Potato	nucleus	45.77	30.4
PGSC0003DMT400047231	Potato	nucleus	47.07	30.27
PGSC0003DMT400064016	Potato	nucleus	47.51	30.04
PGSC0003DMT400015241	Potato	nucleus	32.54	29.64
PGSC0003DMT400004748	Potato	nucleus	0.22	0.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BQQ5	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG401019696	PGSC:PGSC0003DMG401019696
EnsemblPlants:PGSC0003DMT400050723	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF221
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029670C6
SEG:seg	:	:	:	:	:

Description

Cell division protein kinase 7 [Source:PGSC_GENE;Acc:PGSC0003DMG401019696]

Coordinates

chr4:-:55441725..55450346

Molecular Weight (calculated)

52503.7 Da

IEP (calculated)

9.848

GRAVY (calculated)

-0.531

Length

461 amino acids

Sequence
(BLAST)

001: MGCVVGKGYS FMTPERLERM KNENGYVKGN GVEKQRRREQ QQQQMRDIAR IRDQEGNHVE LDQEEKRNGN NGVKIGIIDN GRKIGGDDQL VDGWPKWLVD
101: NIPKEVLLGL VPKTADSYEK LDKVGQGTYS NVYKARDRKS GKIVALKKVR FDTSEPESVK FMAREIIILK KLDHPNIIKL EGLATSRMHY SLYLVFDFMQ
201: SDLTKLINHT QGIRLTQPQI KCYMEQLLCG LEHCHERGIL HRDIKGSNLL IDKNGILKIG DFGLANFYER KTKIPLTSRV VTLWYRAPEL LLGSTNYSVG
301: IDLWSAGCLL AEMFVGRPIL PGRNEIEQLH KIFKLCGSPT EEYWKKVKPP TTFRPPQHKP CFGQIFPNLP HSAFPLLYTL LSVEPHLRGT TSTALQNEFF
401: TTSPLACGLS ELPVFKVEDD GPAQSIDITR KRASKGKRVK KNREGYKKLL SNISENSKEV H

Best Arabidopsis Sequence Match ( AT1G09600.1 )
(BLAST)

001: MGCNCTKGTR PDNDNVDNSN SIVSNVNVKE RRSKPKKTPK KKKKSKSASS SKDNNVGFEE RSNDNKEASL TLLIPIDAKK DDESEKKVNL ERKSSRLVFQ
101: RRPTGIEVGA NNIGTLQQPK MTRICSVSNG ERGAQVMAGW PSWLASVAGE AINGWIPRKA DSFEKLEKIG QGTYSSVYKA RDLETNQLVA LKKVRFANMD
201: PDSVRFMARE IIILRRLDHP NVMKLEGLIT SRVSGSMYLI FEYMEHDLAG LASTPGINFS EAQIKCYMKQ LLHGLEHCHS RGVLHRDIKG SNLLLDHNNN
301: LKIGDFGLAN FYQGHQKQPL TSRVVTLWYR PPELLLGSTD YGVTVDLWST GCILAELFTG KPIMPGRTEV EQLHKIFKLC GSPSEEYWKI SKLPHATIFK
401: PQQPYKRCVA ETFKSLPSSA LALVEVLLAV EPDARGTTAS ALESEFFTTS PLASDPSSLP KYQPRKEIDV KAQEEEAKRK KDTSSKQNDS KQVSRESKAV
501: PAPDSNAESL TSIQKRQGQH NQVSNSDKFN PGEDAASFRI EPLKSGTAKD GHTRYGVSSV NRNGENVMMG SSRSPRKELR TQRSFVQRGT AQLSRFSNSV
601: AARDGSHFAI ANPRWFEDSY NNNNGRQNGG AWSQRLVVKH KEFTKHKESI TVNGEKKERM HCSGPLVSAG GNLDEMLKEH ERQIQLAVRK ARVDKKTNRG
701: DNRQTQAFLA ANGR

Arabidopsis Description

Probable serine/threonine-protein kinase At1g09600 [Source:UniProtKB/Swiss-Prot;Acc:F4I114]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.