Factsheet for PGSC0003DMT400040754

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073963	Potato	cytosol	25.46	51.31
PGSC0003DMT400050723	Potato	cytosol	32.9	38.39
PGSC0003DMT400073941	Potato	cytosol	40.33	38.34
PGSC0003DMT400057839	Potato	cytosol	40.52	37.85
PGSC0003DMT400083223	Potato	cytosol	42.94	36.26
PGSC0003DMT400071458	Potato	nucleus	43.12	36.02
PGSC0003DMT400011092	Potato	cytosol	37.55	35.63
PGSC0003DMT400027661	Potato	nucleus	38.29	35.03
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	41.08	34.0
PGSC0003DMT400032406	Potato	nucleus	44.8	33.24
PGSC0003DMT400034197	Potato	nucleus	41.26	32.94
PGSC0003DMT400047231	Potato	nucleus	43.87	32.91
PGSC0003DMT400063133	Potato	nucleus	41.64	32.28
PGSC0003DMT400015241	Potato	nucleus	28.81	30.63
PGSC0003DMT400064016	Potato	nucleus	41.26	30.45
PGSC0003DMT400003634	Potato	plastid	37.36	30.32
PGSC0003DMT400076796	Potato	nucleus	37.92	30.09
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	31.97	29.71
PGSC0003DMT400004748	Potato	nucleus	2.23	7.95

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102586139	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BAC8
PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400015758	PGSC:PGSC0003DMG400015758	EnsemblPlants:PGSC0003DMT400040754	ScanProsite:PS00107	ScanProsite:PS00109
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF203	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	TMHMM:TMhelix	InterPro:Tyr_kinase_AS	UniParc:UPI000294D67B	RefSeq:XP_006365480.1	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400015758]

Coordinates

chr5:+:49123329..49124945

Molecular Weight (calculated)

61496.0 Da

IEP (calculated)

8.429

GRAVY (calculated)

-0.376

Length

538 amino acids

Sequence
(BLAST)

001: MSIYYVKSND SIAIGSTHEK QNVPRISKSI PNAMADEQIA AGWPAWLVAT GTEAIHGWLP RKLESFHMLD KIGYGAYSTV YKARDLEHNK IVALKRLKFD
101: NVELMMKEIN ILRRLDHENV IKLEGLIITS GIIFGFLYLI FEYMEHDLKE LLSIPGVFFS ESQIKCYMKQ LLNGINHVHS RGILHRDITT SNLLLDNRGI
201: LKIADFGLST LSKSKLNVPL TSCIGTLWYR APELLIGSCF YGIEVDLWSI GCVLGELFNG KGILQGNNEI DQLHKIFKLC GSPSDEYWRK YNSSDAAILK
301: QKVPYNTKIE ETFHDFPVAA LELMQILLSV EPQCRGTAVI AMDHSFFKVE PFASDSFSLP KYPPTKGLDV KWKNSKVCST IFDEINWMDE KYDFTMDALE
401: IAPWVTIDER RRYKMPESAN SSEGANRDKG KEDQEHNFWS FIKGKKKQNH VPSTAASKRV NGHDIKGKKQ QYGLLITASN QNDRDFKGKK SDFYARLPVE
501: SNSMDVDRVL REHDRHIQEV VERTKLEKKM RAKVQVEG

Best Arabidopsis Sequence Match ( AT5G44290.1 )
(BLAST)

001: MGCIISKKKS PKRNPPWKET LEKRSSRINS SRIDDSSQTK EEQDRSNKVR LIESEKFSSS RFSEKHQEIA EIGDTDEDED DDHHPPEELK REPSVVIPPS
101: PETVSKEAEL AAGWPAWLVS VAGEALVNWT PRRASTFEKL EKIGQGTYSS VYKARDLTNN KIVALKRVRF DLSDLESVKF MAREIIVMRR LDHPNVLKLE
201: GLITASVSSS LYLVFEYMDH DLVGLASIPG IKFSEPQVKC YMQQLLSGLH HCHSRGVLHR DIKGSNLLID SNGVLKIADF GLATFFDPQN CVPLTSRVVT
301: LWYRPPELLL GACHYGVGVD LWSTGCILGE LYSGKPILAG KTEVEQLHKI FKLCGSPTED YWRKLKLPPS AAFRPALPYG RRVAEMFKDL PTNVLSLLEA
401: LLSIDPDRRG SAARALESEY FRTEPFACDP SSLPKYPPSK EIDAKIRDDA KRQRPTQEKH ERQDSQTRRS HERKLIPPVK ANNPSLSTAV ENPYLRSCVP
501: GNSQRQMQDM TCNNPTSGRV SHSGPMMKNR NLSRLTYVKD NAAPRIPSYR ANSAGQGGGY VGSDQQMMDQ QRKELRTFNR ADTMDNSKRQ TKIPNDPSWY
601: DSGDNKMYMS GPLLAQPRKV DQMLEEHDRQ LQDFTRQKAK HCRN

Arabidopsis Description

AT5G44290 protein [Source:UniProtKB/TrEMBL;Acc:Q9FKV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.