Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- peroxisome 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073941 | Potato | cytosol | 74.31 | 85.34 |
| PGSC0003DMT400073963 | Potato | cytosol | 32.31 | 78.65 |
| PGSC0003DMT400057839 | Potato | cytosol | 39.85 | 44.97 |
| PGSC0003DMT400050723 | Potato | cytosol | 31.08 | 43.82 |
| PGSC0003DMT400027661 | Potato | nucleus | 38.77 | 42.86 |
| PGSC0003DMT400011092 | Potato | cytosol | 37.08 | 42.5 |
| PGSC0003DMT400040754 | Potato | cytosol | 34.0 | 41.08 |
| PGSC0003DMT400047231 | Potato | nucleus | 43.23 | 39.19 |
| PGSC0003DMT400034197 | Potato | nucleus | 40.46 | 39.02 |
| PGSC0003DMT400032406 | Potato | nucleus | 43.23 | 38.76 |
| PGSC0003DMT400083223 | Potato | cytosol | 37.23 | 37.99 |
| PGSC0003DMT400071458 | Potato | nucleus | 37.08 | 37.42 |
| PGSC0003DMT400064516 | Potato | mitochondrion, nucleus | 31.69 | 35.58 |
| PGSC0003DMT400063133 | Potato | nucleus | 37.54 | 35.16 |
| PGSC0003DMT400003634 | Potato | plastid | 35.69 | 34.99 |
| PGSC0003DMT400064016 | Potato | nucleus | 39.08 | 34.84 |
| PGSC0003DMT400076796 | Potato | nucleus | 35.38 | 33.92 |
| PGSC0003DMT400015241 | Potato | nucleus | 24.92 | 32.02 |
| PGSC0003DMT400004748 | Potato | nucleus | 1.54 | 6.62 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:102593745 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M1CSV6 | PFAM:PF00069 | EnsemblPlantsGene:PGSC0003DMG400028730 |
| PGSC:PGSC0003DMG400028730 | EnsemblPlants:PGSC0003DMT400073927 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 |
| PANTHER:PTHR24056:SF203 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0002955B67 | RefSeq:XP_015170877.1 | SEG:seg | : | : | : |
Description
CRK1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028730]
Coordinates
chr7:+:6422986..6424938
Molecular Weight (calculated)
73438.1 Da
IEP (calculated)
9.243
GRAVY (calculated)
-0.530
Length
650 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSHGKSST MRDRSVEGTV SSDVVETFVA EEKEEILHTR RWKLNPRLSR GVTKGIEGEL VVAGWPIWLV AAAGNALNGW LPRSIDTLDK IDKIGQGTYS
101: NVYIARDCLL NKLVALKKVR FDTFDPESVK FMAREIIILR RLGDHPNVIK LEGLAISKMK YSLYLVFECM EYDLKAIQEH KGVKFSEPEI KCYMNQLLKG
201: LDHCHSHGIL HRDVKTSNLL VDKDGILKLA DFGLSTFFDP EQSKPLTSKI VTLWYRPPEL LLGSNSYGVG VDLWGVGCVL GELFTGKPIM PGKTEVEQLH
301: KIFKLCGSPS DDFWNKSKLP NAKIFKPKEP YRRILYTTFH DLPAAAVGLM DTLLSLKAEY RGTAALALQN EFFTTEPFAC DTSSLPQSPP RAEIYAKMTE
401: IKRRVRNYAH DRSVRAIPAA EANAELKSNI DRRQLLTHSK ARNRLEKTNE YVSGGVLDEG TNSSECFQVS SRKEGSVNYT QREIRKEPNH DIKGKKKWSG
501: PLLREHDNMI LGKESTAKGN DHDSKGKTNL GPSTSTNDQI FTLLPDKWTN MQGLPREHKA RILKDAQLVM SDKKKMSEGE GNNSNKLIEQ LFPPAESDGL
601: DFLEDSQFFC PLPFTSKPID VDRIIREHDR QIQESVERAK QQKKLAKARY
101: NVYIARDCLL NKLVALKKVR FDTFDPESVK FMAREIIILR RLGDHPNVIK LEGLAISKMK YSLYLVFECM EYDLKAIQEH KGVKFSEPEI KCYMNQLLKG
201: LDHCHSHGIL HRDVKTSNLL VDKDGILKLA DFGLSTFFDP EQSKPLTSKI VTLWYRPPEL LLGSNSYGVG VDLWGVGCVL GELFTGKPIM PGKTEVEQLH
301: KIFKLCGSPS DDFWNKSKLP NAKIFKPKEP YRRILYTTFH DLPAAAVGLM DTLLSLKAEY RGTAALALQN EFFTTEPFAC DTSSLPQSPP RAEIYAKMTE
401: IKRRVRNYAH DRSVRAIPAA EANAELKSNI DRRQLLTHSK ARNRLEKTNE YVSGGVLDEG TNSSECFQVS SRKEGSVNYT QREIRKEPNH DIKGKKKWSG
501: PLLREHDNMI LGKESTAKGN DHDSKGKTNL GPSTSTNDQI FTLLPDKWTN MQGLPREHKA RILKDAQLVM SDKKKMSEGE GNNSNKLIEQ LFPPAESDGL
601: DFLEDSQFFC PLPFTSKPID VDRIIREHDR QIQESVERAK QQKKLAKARY
001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR
Arabidopsis Description
F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.