Factsheet for PGSC0003DMT400076796

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003634	Potato	plastid	73.16	74.81
KRG93581	Soybean	plastid	48.97	56.66
KRH18441	Soybean	nucleus	48.38	55.88
PGSC0003DMT400073963	Potato	cytosol	20.8	52.81
GSMUA_Achr6P24660_001	Banana	nucleus	49.56	51.53
VIT_14s0108g01270.t01	Wine grape	nucleus	53.54	50.98
PGSC0003DMT400063133	Potato	nucleus	50.59	49.42
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	48.23	49.4
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	48.23	49.25
GSMUA_Achr2P13490_001	Banana	nucleus	47.2	49.16
AT5G39420.1	Thale cress	nucleus	46.17	48.6
KRH44946	Soybean	nucleus	48.53	48.53
GSMUA_Achr4P28060_001	Banana	nucleus	48.08	48.44
KRH01235	Soybean	nucleus, plastid	47.94	48.29
Bra028432.1-P	Field mustard	nucleus, plastid	46.31	48.23
CDY37004	Canola	nucleus	46.17	48.15
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	48.82	47.35
TraesCS2A01G182800.1	Wheat	plastid	47.49	46.53
TraesCS2D01G190600.1	Wheat	plastid	47.49	46.53
GSMUA_Achr4P03350_001	Banana	nucleus	45.72	46.48
HORVU2Hr1G034440.3	Barley	plastid	47.49	46.33
TraesCS2B01G209300.1	Wheat	plastid	47.2	46.24
OQU90194	Sorghum	plastid	48.23	46.19
PGSC0003DMT400057839	Potato	cytosol	38.94	45.83
CDX74463	Canola	nucleus	41.3	45.6
PGSC0003DMT400050723	Potato	cytosol	30.83	45.34
Os07t0596600-02	Rice	plasma membrane	47.05	45.12
Zm00001d006759_P012	Maize	plastid	47.79	44.94
CDX74282	Canola	plastid	41.15	44.78
PGSC0003DMT400027661	Potato	nucleus	38.79	44.73
AT3G01085.3	Thale cress	plastid	40.71	43.74
PGSC0003DMT400011092	Potato	cytosol	36.58	43.74
CDY55799	Canola	plastid	40.12	43.38
CDY34698	Canola	plastid	40.12	43.24
Zm00001d022041_P001	Maize	plastid	47.64	43.12
PGSC0003DMT400073941	Potato	cytosol	34.37	41.17
PGSC0003DMT400071458	Potato	nucleus	38.64	40.68
PGSC0003DMT400083223	Potato	cytosol	38.2	40.66
Bra041128.1-P	Field mustard	plastid	31.86	40.45
PGSC0003DMT400032406	Potato	nucleus	41.45	38.76
PGSC0003DMT400034197	Potato	nucleus	37.76	37.98
PGSC0003DMT400040754	Potato	cytosol	30.09	37.92
PGSC0003DMT400047231	Potato	nucleus	39.53	37.38
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	31.86	37.31
PGSC0003DMT400064016	Potato	nucleus	39.09	36.35
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	33.92	35.38
PGSC0003DMT400015241	Potato	nucleus	25.52	34.19
CDX67429	Canola	cytosol, plastid	46.17	33.73
CDX91965	Canola	nucleus	41.15	26.93
Bra001023.1-P	Field mustard	nucleus	41.59	26.5
CDY37546	Canola	nucleus	40.86	26.48
Bra039147.1-P	Field mustard	nucleus	40.86	25.6
CDY43266	Canola	nucleus	38.2	24.27
PGSC0003DMT400004748	Potato	nucleus	1.77	7.95

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102597095	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CXE5	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400029868	PGSC:PGSC0003DMG400029868
EnsemblPlants:PGSC0003DMT400076796	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF188
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294C008
RefSeq:XP_006350168.1	SEG:seg	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400029868]

Coordinates

chr3:+:26149304..26155167

Molecular Weight (calculated)

75956.9 Da

IEP (calculated)

9.882

GRAVY (calculated)

-0.637

Length

678 amino acids

Sequence
(BLAST)

001: MGCVSSKQAR AHSPPPRRNS SLTTPIIINA DITEHNVYHV KAGFAPLEKI KEEPEKEKKE ESLIQRSSSN SKASKKGNSD KKVNFSIKFG RLNEGEHLAA
101: GWPVWLTAIA SEAIEGWMPL KSDAFQKLEK IGQGTYSSVY RARDVETGKM VALKKVKFDN FQPESVRFMA REITVLRKLD HPNVMKLLGI VTSRLSCCIY
201: LVFEYMEHDL SGLLSCPDVK FTDSQIKCYM QQLLSGLEHC HSRGIMHRDI KASNVLVNNE GILKIADFGL ANFLSARHKQ PLTSRVVTLW YRPPELLLGS
301: TSYGLTVDLW SAGCVFAELF FGRPFLKGRT EVEQLHKIFK LCGSPSEDYW KKSRLPLATI FKPQHPYESV LRDRCKELPK TAVNLIETLL SIDPHKRGAA
401: SSALDSVYFN TKPYACTPSS LPKYPPNKEI DAKFREEARR KRASSTVRAS GASRNSRKVQ KSLQESRNFG IVSTEEAEAN IHNGRRNIGG SGHISKGKGA
501: TVARISMKSS YDTVSEASQT TEESQGESIR SVPAQTASSG TAWAKMRKQD SAASRPHPQA NSKSQKLIAF DTSSVLHSAD TLDLNMPGNN DFSSRINNEA
601: RGCNNDAKHS ISRQYTHHEQ RDSFGSSDIH QSQEISEDYN GRQRRVVFSG PLIHQRSDPN QDYQTHQDGQ RSRFYKDL

Best Arabidopsis Sequence Match ( AT1G74330.1 )
(BLAST)

001: MGCVSSKQTV SVTPAIDHSG VFKDNENECS GSGRIVVEDP PRPTLKKLVS WRSRSGKRRS QKSGSELGSE SGRASDSLSF RLGNVSRYLE AEQVAAGWPA
101: WLSNVAGEAI HGWVPLRSDA FEKLEKIGQG TYSNVFRAVE TETGRIVALK KVRFDNFEPE SVKFMAREIL ILRRLNHPNI IKLEGLITSK LSCNIQLVFE
201: YMEHDLTGLL SSPDIKFTTP QIKCYMKQLL SGLDHCHSRG VMHRDIKGSN LLLSNEGILK VADFGLANFS NSSGHKKKPL TSRVVTLWYR PPELLLGATD
301: YGASVDLWSV GCVFAELLLG KPILRGRTEV EQLHKIFKLC GSPPEDYWKK SKLPHAMLFK PQQTYDSCLR ETLKDLSETE INLIETLLSI DPHKRGTASS
401: ALVSQYFTTK PFACDPSSLP IYPPSKEIDT KHRDEAARKK ISGNGRRGID PRKPSRKAHS FNRLAPDVRH QTETFQKRIG HLVHSSIESD ARLCGKLQNP
501: LDHKKDEASH VKHASQGDVP FSGPLQVSKS NSFAWAKREK DDVCVRVHNR SLSRGYIPSL SGHSPAFNGK SDVESKINKD EKEDKTDSRG EESYEMVKRS
601: MLKQWRQLER PDSFGASDEY HSQELSLGLY QRDEMAKKMG NNLGDGDKIE FSGPLLSQSY GVDELLERHE RNIRKLIRKP WFQKVQDKQK KILLFSSEL

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.