Factsheet for PGSC0003DMT400064016

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g103350.2.1	Tomato	nucleus	96.02	95.63
Zm00001d002645_P001	Maize	cytosol	24.14	73.95
HORVU5Hr1G035950.2	Barley	cytosol	27.57	73.63
VIT_12s0035g01180.t01	Wine grape	nucleus	65.43	64.37
GSMUA_Achr10P...	Banana	cytosol	39.51	57.95
CDX93496	Canola	nucleus	53.09	57.33
KRH06043	Soybean	nucleus	45.4	56.97
GSMUA_Achr6P07440_001	Banana	cytosol	48.42	56.57
KRH26282	Soybean	nucleus	54.32	55.85
PGSC0003DMT400071458	Potato	nucleus	48.83	55.28
CDY31076	Canola	nucleus	47.87	55.22
CDY58380	Canola	nucleus	44.17	54.95
AT1G09600.1	Thale cress	nucleus	53.36	54.48
CDY29169	Canola	nucleus	49.52	54.45
CDY39924	Canola	nucleus	49.52	54.45
Bra027895.1-P	Field mustard	nucleus	49.52	54.37
Bra031674.1-P	Field mustard	nucleus	51.44	54.03
Bra030788.1-P	Field mustard	nucleus	47.6	53.72
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	33.06	53.67
GSMUA_Achr6P28920_001	Banana	plastid	48.83	53.61
CDY53144	Canola	nucleus	49.11	53.35
PGSC0003DMT400073963	Potato	cytosol	19.48	53.18
CDY20686	Canola	nucleus	47.87	53.12
AT1G57700.1	Thale cress	nucleus	49.66	52.31
PGSC0003DMT400057839	Potato	cytosol	41.29	52.26
PGSC0003DMT400027661	Potato	nucleus	42.11	52.21
GSMUA_Achr2P05620_001	Banana	cytosol	48.15	52.15
CDY31800	Canola	nucleus	48.56	52.14
GSMUA_Achr5P16890_001	Banana	nucleus	49.11	51.81
PGSC0003DMT400083223	Potato	cytosol	45.13	51.65
Os08t0112500-01	Rice	nucleus	52.81	51.47
PGSC0003DMT400011092	Potato	cytosol	39.92	51.32
PGSC0003DMT400032406	Potato	nucleus	50.89	51.17
TraesCS7A01G319500.1	Wheat	nucleus	51.99	51.01
HORVU7Hr1G076360.30	Barley	nucleus	51.99	51.01
TraesCS7D01G316100.1	Wheat	nucleus	51.99	51.01
TraesCS7B01G220500.1	Wheat	nucleus	51.71	50.74
KXG24243	Sorghum	nucleus	52.4	50.73
Bra035472.1-P	Field mustard	nucleus	48.83	50.71
GSMUA_Achr8P08480_001	Banana	nucleus	45.68	50.38
EES15821	Sorghum	mitochondrion	44.17	49.85
Zm00001d049698_P003	Maize	nucleus	52.4	49.67
Zm00001d035050_P002	Maize	nucleus	51.17	49.54
Bra020008.1-P	Field mustard	nucleus	51.03	49.34
TraesCS5A01G110100.1	Wheat	endoplasmic reticulum, plasma membrane	43.9	49.16
TraesCS5D01G118300.1	Wheat	endoplasmic reticulum, plasma membrane	43.35	48.54
EES05258	Sorghum	nucleus	45.4	47.63
PGSC0003DMT400050723	Potato	cytosol	30.04	47.51
PGSC0003DMT400047231	Potato	nucleus	46.64	47.42
TraesCS6D01G184000.1	Wheat	cytosol, nucleus, peroxisome	44.99	47.26
Zm00001d016846_P002	Maize	cytosol	45.54	47.09
TraesCS6B01G231200.2	Wheat	cytosol	44.58	46.63
HORVU6Hr1G046160.12	Barley	nucleus	44.58	46.43
Zm00001d023945_P003	Maize	mitochondrion	43.21	46.32
PGSC0003DMT400034197	Potato	nucleus	42.66	46.14
TraesCS4D01G086800.1	Wheat	mitochondrion	39.92	45.97
Os11t0242500-01	Rice	mitochondrion	36.08	45.42
TraesCS4A01G227200.2	Wheat	mitochondrion	40.19	45.36
TraesCS5B01G110400.1	Wheat	nucleus	19.89	45.17
Os02t0559300-02	Rice	plasma membrane	45.13	45.13
HORVU4Hr1G015320.4	Barley	mitochondrion	39.78	44.89
PGSC0003DMT400073941	Potato	cytosol	34.84	44.88
TraesCS6A01G192900.2	Wheat	nucleus	44.17	44.72
CDY22631	Canola	mitochondrion	50.89	44.54
CDY06363	Canola	mitochondrion	50.75	44.31
TraesCS4B01G089100.3	Wheat	mitochondrion	40.19	42.53
PGSC0003DMT400063133	Potato	nucleus	39.92	41.93
PGSC0003DMT400040754	Potato	cytosol	30.45	41.26
Zm00001d048994_P003	Maize	vacuole	37.31	41.09
CDY50891	Canola	nucleus, plastid	53.09	40.44
PGSC0003DMT400003634	Potato	plastid	36.35	39.97
PGSC0003DMT400015241	Potato	nucleus	27.16	39.13
PGSC0003DMT400076796	Potato	nucleus	36.35	39.09
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	34.84	39.08
GSMUA_Achr9P08070_001	Banana	nucleus	50.34	38.71
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	30.73	38.69
GSMUA_Achr6P17460_001	Banana	cytosol	49.52	38.36
PGSC0003DMT400004748	Potato	nucleus	2.33	11.26
TraesCS7A01G319600.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G118400.1	Wheat	plastid	0.0	0.0
TraesCS5A01G110200.1	Wheat	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102584080	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CBL0	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG401024882
PGSC:PGSC0003DMG401024882	EnsemblPlants:PGSC0003DMT400064016	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF203	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002959558	RefSeq:XP_006349306.1	SEG:seg	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401024882]

Coordinates

chr1:+:80070505..80077883

Molecular Weight (calculated)

80616.7 Da

IEP (calculated)

9.408

GRAVY (calculated)

-0.602

Length

729 amino acids

Sequence
(BLAST)

001: MGCVCSKGVS VKKNGRKRNK EKEKNKSSSK RLIASDKDED VLVDVDIGGN DATTRLISTE PIEKSAGSTP PAWDEGEKKP MVFEKPEVPK VQSLAATNAT
101: EVGEQPQINR IFCVRNGVDG AQVVAGWPSW LTNVAGEAIK GWVPRKGDSF EKLDQIGQGT YSCVFRAKDL ETGKIVAMKQ VRFINMDPES VRFMAREIII
201: LRRLDHPNVM KLEGLVTSRV SGSLFLVFEY MEHDLTGLAA SPAVKFTESQ IKCYIQQLLR GLEYCHSRGV LHRDIKGSNL LIDNSGNLKI GDFGLATLYQ
301: TNQRQPLTSR VVTLWYRPPE LLLGATNYGV AVDLWSSGCI VAELFAGKPI MPGRTEVEQL HKIFKLCGSP SEEYWKKSKL PHATIFKPQQ PYKHCLANIF
401: KDFPPSALVL LDSLLAFEPE YRGSATLALQ NEFFTTKPLP CDPSSLPKYP PSKEFDAKMR DEEARRQRGE GTKGSGIESC RKAAKQSKAV PAPDANAELP
501: ASIQKRKQQL NPTSVSEKYN HEQDGGPVFP FDPSRGSLNN GHLSQVSDSG NSINTNTNGL GPLMSSQQAF DSSIFGELSA QKSFRPHGAA AHLSRFSNSV
601: AAHGSSRYDM SRAVSTQSQW PEEHTTGTYN QLNDSDSSYS LLGKDSSNKK DKHTTGKESA VGYIPKKNRI HYSGPLMPPG GNIDEMLKEH EKQIQQAVRK
701: ARIDRNKIRK NLTDNGQTES LLHYTTNGR

Best Arabidopsis Sequence Match ( AT1G09600.1 )
(BLAST)

001: MGCNCTKGTR PDNDNVDNSN SIVSNVNVKE RRSKPKKTPK KKKKSKSASS SKDNNVGFEE RSNDNKEASL TLLIPIDAKK DDESEKKVNL ERKSSRLVFQ
101: RRPTGIEVGA NNIGTLQQPK MTRICSVSNG ERGAQVMAGW PSWLASVAGE AINGWIPRKA DSFEKLEKIG QGTYSSVYKA RDLETNQLVA LKKVRFANMD
201: PDSVRFMARE IIILRRLDHP NVMKLEGLIT SRVSGSMYLI FEYMEHDLAG LASTPGINFS EAQIKCYMKQ LLHGLEHCHS RGVLHRDIKG SNLLLDHNNN
301: LKIGDFGLAN FYQGHQKQPL TSRVVTLWYR PPELLLGSTD YGVTVDLWST GCILAELFTG KPIMPGRTEV EQLHKIFKLC GSPSEEYWKI SKLPHATIFK
401: PQQPYKRCVA ETFKSLPSSA LALVEVLLAV EPDARGTTAS ALESEFFTTS PLASDPSSLP KYQPRKEIDV KAQEEEAKRK KDTSSKQNDS KQVSRESKAV
501: PAPDSNAESL TSIQKRQGQH NQVSNSDKFN PGEDAASFRI EPLKSGTAKD GHTRYGVSSV NRNGENVMMG SSRSPRKELR TQRSFVQRGT AQLSRFSNSV
601: AARDGSHFAI ANPRWFEDSY NNNNGRQNGG AWSQRLVVKH KEFTKHKESI TVNGEKKERM HCSGPLVSAG GNLDEMLKEH ERQIQLAVRK ARVDKKTNRG
701: DNRQTQAFLA ANGR

Arabidopsis Description

Probable serine/threonine-protein kinase At1g09600 [Source:UniProtKB/Swiss-Prot;Acc:F4I114]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.