Factsheet for VIT_12s0035g01180.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002645_P001	Maize	cytosol	25.51	79.41
HORVU5Hr1G035950.2	Barley	cytosol	26.18	71.06
PGSC0003DMT400064016	Potato	nucleus	64.37	65.43
Solyc01g103350.2.1	Tomato	nucleus	64.24	65.03
VIT_05s0124g00500.t01	Wine grape	cytosol	35.36	63.44
KRH06043	Soybean	nucleus	47.77	60.93
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	35.63	60.55
GSMUA_Achr10P...	Banana	cytosol	40.49	60.36
CDX93496	Canola	nucleus	54.79	60.15
KRH26282	Soybean	nucleus	56.14	58.67
VIT_18s0001g06780.t01	Wine grape	nucleus	52.5	58.41
GSMUA_Achr6P07440_001	Banana	cytosol	48.85	58.01
Os08t0112500-01	Rice	nucleus	58.03	57.49
VIT_05s0020g01890.t01	Wine grape	cytosol	44.53	57.39
AT1G09600.1	Thale cress	nucleus	55.06	57.14
CDY58380	Canola	nucleus	44.94	56.83
CDY31076	Canola	nucleus	48.45	56.8
Bra031674.1-P	Field mustard	nucleus	53.04	56.63
AT1G57700.1	Thale cress	nucleus	52.77	56.5
CDY53144	Canola	nucleus	51.15	56.48
Bra027895.1-P	Field mustard	nucleus	50.61	56.48
CDY29169	Canola	nucleus	50.47	56.41
VIT_19s0014g02670.t01	Wine grape	nucleus	54.12	56.32
CDY39924	Canola	nucleus	50.34	56.26
TraesCS7A01G319500.1	Wheat	nucleus	56.28	56.12
TraesCS7D01G316100.1	Wheat	nucleus	56.14	55.99
GSMUA_Achr2P05620_001	Banana	cytosol	50.74	55.87
HORVU7Hr1G076360.30	Barley	nucleus	56.01	55.85
CDY31800	Canola	nucleus	51.15	55.82
TraesCS7B01G220500.1	Wheat	nucleus	55.74	55.59
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	33.6	55.46
KXG24243	Sorghum	nucleus	56.28	55.38
Bra030788.1-P	Field mustard	nucleus	48.04	55.11
VIT_18s0072g00140.t01	Wine grape	cytosol	31.31	54.85
GSMUA_Achr8P08480_001	Banana	nucleus	48.85	54.77
Zm00001d035050_P002	Maize	nucleus	55.6	54.71
Zm00001d049698_P003	Maize	nucleus	56.55	54.49
GSMUA_Achr6P28920_001	Banana	plastid	48.58	54.22
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	42.51	54.12
CDY20686	Canola	nucleus	47.91	54.03
GSMUA_Achr5P16890_001	Banana	nucleus	50.34	53.98
Bra035472.1-P	Field mustard	nucleus	51.01	53.85
VIT_17s0000g00620.t01	Wine grape	nucleus	41.57	52.47
Bra020008.1-P	Field mustard	nucleus	52.77	51.86
EES05258	Sorghum	nucleus	48.18	51.37
TraesCS6D01G184000.1	Wheat	cytosol, nucleus, peroxisome	47.91	51.15
VIT_07s0141g00280.t01	Wine grape	cytosol	17.0	50.81
EES15821	Sorghum	mitochondrion	43.86	50.31
HORVU6Hr1G046160.12	Barley	nucleus	47.23	50.0
TraesCS6B01G231200.2	Wheat	cytosol	46.96	49.93
TraesCS5A01G110100.1	Wheat	endoplasmic reticulum, plasma membrane	43.86	49.92
Zm00001d016846_P002	Maize	cytosol	47.23	49.65
TraesCS5D01G118300.1	Wheat	endoplasmic reticulum, plasma membrane	43.59	49.62
Os02t0559300-02	Rice	plasma membrane	48.58	49.38
TraesCS6A01G192900.2	Wheat	nucleus	47.37	48.75
Zm00001d023945_P003	Maize	mitochondrion	44.67	48.68
CDY22631	Canola	mitochondrion	52.77	46.94
TraesCS4D01G086800.1	Wheat	mitochondrion	39.95	46.76
CDY06363	Canola	mitochondrion	52.63	46.71
TraesCS4A01G227200.2	Wheat	mitochondrion	40.49	46.44
TraesCS5B01G110400.1	Wheat	nucleus	19.97	46.11
HORVU4Hr1G015320.4	Barley	mitochondrion	39.95	45.82
Os11t0242500-01	Rice	mitochondrion	35.49	45.42
VIT_17s0000g06650.t01	Wine grape	plastid	40.22	43.44
TraesCS4B01G089100.3	Wheat	mitochondrion	40.22	43.25
CDY50891	Canola	nucleus, plastid	55.33	42.84
Zm00001d048994_P003	Maize	vacuole	37.79	42.3
GSMUA_Achr9P08070_001	Banana	nucleus	53.58	41.88
GSMUA_Achr6P17460_001	Banana	cytosol	52.63	41.45
VIT_14s0108g01270.t01	Wine grape	nucleus	38.73	40.31
VIT_06s0009g01800.t01	Wine grape	nucleus	27.53	39.46
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	30.36	37.63
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	18.62	29.68
TraesCS7A01G319600.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G118400.1	Wheat	plastid	0.0	0.0
TraesCS5A01G110200.1	Wheat	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259144	wikigene:100259144	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ProteinID:CBI29684
ProteinID:CBI29684.3	UniProt:D7TGR2	EMBL:FN595990	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100259144	wikigene:LOC100259144	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF203	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC54478	UniParc:UPI0001BE37BE	ArrayExpress:VIT_12s0035g01180
EnsemblPlantsGene:VIT_12s0035g01180	EnsemblPlants:VIT_12s0035g01180.t01	unigene:Vvi.11664	RefSeq:XP_002264491	RefSeq:XP_002264491.2	SEG:seg

Description

No Description!

Coordinates

chr12:-:20975399..20980710

Molecular Weight (calculated)

82370.6 Da

IEP (calculated)

10.003

GRAVY (calculated)

-0.756

Length

741 amino acids

Sequence
(BLAST)

001: MGCICSKGSS VNEYVEKNAR DKELSKKSSK RLVASSRREG VVVEGYGGSN DATARLIPTQ SAEDNAASTP VSWDKRQKKS MAIDNSTRAA VQKPSTMEVG
101: MNAGQPQMTR IVSMGNGVEA AQAAAGWPSW LTAVAAEAID GWVPRKADSF ERLDKIGQGT YSSVYKARDL ETGKTVALKK VRFANMDPES VRFMAREIHI
201: LRRLDHPNVM KLEGLITSRM SGSLYLVFEY MDHDLAGLAS SPKIKFTEPQ IKCYMQQLLR GLEHCHSRGV LHRDIKGSNL LIDNNGNLKI GDFGLATFFQ
301: PYQKQPLTSR VVTLWYRPPE LLLGATSYGV AVDLWSAGCI LAELYAGKPI MQGRTEVEQL HRIFKLCGSP SEEYWKRAKL PHATIFKPQH PYRRCVAETF
401: SDFPSPALSL MDVLLAIEPE RRGSASSALH NEFFTTKPLP CDTSNLPKYP PSKEFDAKLR EEEARRRRAA GSKGRGHEST RKVSRESKAV PAPDANAELQ
501: VSIQKRREQS NPKSKSEKFI PEEDGGSGFP IEPTKGTTRN GFSHSGKSIH PTAFGSARNM DVNEDEAQMG PGRGSNSSRN GAELRIQKSY SHRGGSQLSM
601: FSGSVAVQGS SRFDNDRENG MNRHWPEERC NARYNELGGA ESSEKHQWSH HLLDRPKSSH KKDEQPSEKG SSMGYAPKKN RIHYSGPLMP PGGNLEEMLK
701: EHEKQIQLAV RKARLDKVKT KKAYNDNGQT ESLLPHGRNN R

Best Arabidopsis Sequence Match ( AT1G57700.1 )
(BLAST)

001: MGCICSKGVR TNDDYIETNH VSIGKENPKA SKKQSDSEET SVNGNEATLR LIPDDVKDTF SDEEVEELEE KKESSFEMKS CESVLQKGNV LEIVDNVGPL
101: QPRMSRIGSV SNGDRAAKVI AGWPSWLVSV AGEAINGWIP RSADSFEKLE MIGQGTYSSV YRARDLETNQ IVALKKVRFA NMDPESVRFM AREIIILRRL
201: NHPNVMKLEG LIISKASGSM YLIFEYMDHD LAGLASTPGI KFSQAQIKCY MKQLLLGLEH CHSCGVLHRD IKCSNLLLDR NNNLKIGDFG LSNFYRGQRK
301: QPLTSRVVTL WYRPPELLLG STDYGVTVDL WSTGCILAEL FTGKPLLPGR TEVEQMHKIF KLCGSPSEEY WRRSRLRHAT IFKPQHPYKR CVADTFKDLP
401: SSALALLEVL LAVEPDARGT ASSALQSEFF TTKPFPSEPS SLPRYQPRKE FDAKLREEEA RRRKGSSSKQ NEQKRLARES KAVPAPSANA ELLASIQKRL
501: GETNRTSISE KFNPEGDSGN GFRIEPLKGN TAQNPYPIYT NGDNHPNGSS QLRTQRSYVQ RGSGQLSRFS NSMAPTRDGS QFGSMRDAIV NQRWLEDGSE
601: NFNLSQRLLE KPNGIRKDDP SSSSKESIMG YDGEKRGRIQ YSGPLIPGEG NLDEMLKEHE RQILLAVRRA QADKAKRDDN RQAQTLFPAN GR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I854]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.