Factsheet for VIT_18s0001g06780.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002645_P001	Maize	cytosol	26.43	73.95
HORVU5Hr1G035950.2	Barley	cytosol	28.98	70.7
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	28.98	69.93
VIT_05s0124g00500.t01	Wine grape	cytosol	38.14	61.5
CDY48795	Canola	nucleus	46.55	60.43
PGSC0003DMT400071458	Potato	nucleus	56.91	58.85
Solyc11g045610.1.1	Tomato	nucleus	56.31	58.59
Bra037899.1-P	Field mustard	nucleus	54.2	58.51
CDX86879	Canola	nucleus	54.2	58.51
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	38.14	58.26
CDX99520	Canola	nucleus	53.6	58.14
PGSC0003DMT400083223	Potato	cytosol	55.56	58.08
GSMUA_Achr6P07440_001	Banana	cytosol	54.35	58.01
GSMUA_Achr10P...	Banana	cytosol	42.94	57.55
AT1G33770.1	Thale cress	nucleus	52.25	56.68
CDY70545	Canola	nucleus	53.15	56.55
CDY70577	Canola	nucleus	53.15	56.55
Bra010213.1-P	Field mustard	nucleus	53.15	56.55
AT4G10010.2	Thale cress	nucleus	54.95	56.39
CDY15287	Canola	nucleus	51.95	55.99
CDX93753	Canola	nucleus	52.4	55.93
Bra028011.1-P	Field mustard	nucleus	52.4	55.84
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	37.09	55.01
CDX68307	Canola	plastid	50.6	54.62
Bra003921.1-P	Field mustard	plastid	50.75	54.34
CDY36688	Canola	plastid	50.3	54.3
CDX96330	Canola	plastid	51.65	54.09
Bra016132.1-P	Field mustard	plastid	51.65	54.09
GSMUA_Achr6P28920_001	Banana	plastid	53.75	53.92
VIT_05s0020g01890.t01	Wine grape	cytosol	46.55	53.91
CDX72813	Canola	plastid	51.35	53.77
Solyc06g064660.2.1	Tomato	endoplasmic reticulum, plasma membrane	55.26	53.64
KRH77684	Soybean	nucleus	50.75	53.31
VIT_18s0072g00140.t01	Wine grape	cytosol	33.78	53.19
KRH27807	Soybean	nucleus	49.7	53.13
Bra007973.1-P	Field mustard	nucleus, plastid	51.2	52.79
AT1G71530.1	Thale cress	plastid	51.65	52.52
VIT_12s0035g01180.t01	Wine grape	nucleus	58.41	52.5
GSMUA_Achr2P05620_001	Banana	cytosol	53.0	52.45
CDY03697	Canola	nucleus, plastid	51.05	52.39
CDY67268	Canola	nucleus, plastid	50.75	52.0
GSMUA_Achr5P16890_001	Banana	nucleus	53.3	51.37
EES15821	Sorghum	mitochondrion	49.25	50.77
VIT_19s0014g02670.t01	Wine grape	nucleus	54.2	50.7
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	44.14	50.52
VIT_17s0000g00620.t01	Wine grape	nucleus	44.29	50.26
GSMUA_Achr8P08480_001	Banana	nucleus	49.55	49.92
TraesCS5A01G110100.1	Wheat	endoplasmic reticulum, plasma membrane	48.5	49.62
TraesCS6D01G184000.1	Wheat	cytosol, nucleus, peroxisome	51.65	49.57
EES05258	Sorghum	nucleus	51.35	49.21
TraesCS5D01G118300.1	Wheat	endoplasmic reticulum, plasma membrane	47.9	49.0
TraesCS6B01G231200.2	Wheat	cytosol	51.2	48.92
HORVU6Hr1G046160.12	Barley	nucleus	51.35	48.86
VIT_07s0141g00280.t01	Wine grape	cytosol	18.02	48.39
Zm00001d016846_P002	Maize	cytosol	50.9	48.09
Zm00001d023945_P003	Maize	mitochondrion	48.95	47.94
TraesCS7D01G316100.1	Wheat	nucleus	52.85	47.38
TraesCS6A01G192900.2	Wheat	nucleus	51.2	47.36
Os08t0112500-01	Rice	nucleus	53.15	47.33
TraesCS7A01G319500.1	Wheat	nucleus	52.7	47.24
TraesCS7B01G220500.1	Wheat	nucleus	52.7	47.24
HORVU7Hr1G076360.30	Barley	nucleus	52.7	47.24
TraesCS4D01G086800.1	Wheat	mitochondrion	44.74	47.08
Os11t0242500-01	Rice	mitochondrion	40.84	46.98
TraesCS4A01G227200.2	Wheat	mitochondrion	45.5	46.9
TraesCS5B01G110400.1	Wheat	nucleus	22.52	46.73
KXG24243	Sorghum	nucleus	52.55	46.48
Zm00001d035050_P002	Maize	nucleus	51.8	45.82
Os02t0559300-02	Rice	plasma membrane	50.15	45.82
Zm00001d049698_P003	Maize	nucleus	52.85	45.77
HORVU4Hr1G015320.4	Barley	mitochondrion	44.14	45.51
TraesCS4B01G089100.3	Wheat	mitochondrion	45.2	43.69
Zm00001d048994_P003	Maize	vacuole	42.49	42.75
VIT_17s0000g06650.t01	Wine grape	plastid	43.39	42.13
GSMUA_Achr6P17460_001	Banana	cytosol	55.71	39.43
VIT_06s0009g01800.t01	Wine grape	nucleus	30.48	39.27
VIT_14s0108g01270.t01	Wine grape	nucleus	41.59	38.9
GSMUA_Achr9P08070_001	Banana	nucleus	54.05	37.97
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	33.03	36.79
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	20.87	29.89
TraesCS7A01G319600.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G118400.1	Wheat	plastid	0.0	0.0
TraesCS5A01G110200.1	Wheat	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100265500	wikigene:100265500	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EMBL:AM449828
ProteinID:CAN67625	ProteinID:CAN67625.1	ProteinID:CCB56103	ProteinID:CCB56103.1	ncoils:Coil	UniProt:F6HN48
EMBL:FN595996	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100265500	wikigene:LOC100265500	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF203	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00019856B3	ArrayExpress:VIT_18s0001g06780	EnsemblPlantsGene:VIT_18s0001g06780	EnsemblPlants:VIT_18s0001g06780.t01	RefSeq:XP_002277016
RefSeq:XP_002277016.2	RefSeq:XP_010645924.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18_random:+:5062047..5073679

Molecular Weight (calculated)

73330.4 Da

IEP (calculated)

9.678

GRAVY (calculated)

-0.627

Length

666 amino acids

Sequence
(BLAST)

001: MGCICSKEAS VDEYVDYNER EKEKGKELNK DSVQLVAPST GEEFVMGPGG GGGHGRTGGS VHPISKSALQ GNVGSAPIRA MEGEKKAMTA DRPTKASHQR
101: RLTLDMENNV GPSPMSRIVS MPNGAKGEQI VAGWPSWLSS VAGEAIQGWV PLRPESYEKL DKIGQGTYST VYRARDLDSG KIVALKKVRF GNMDPESVRF
201: MAREIHVLRK LDHPNVMKLE GLITSRTSGT LYLVFEYMEH DLAGLSATPG IKFTEPQIKC YMQQLLRGLE HCHSRGVLHR DIKGSNLLID NKGVLKIGDF
301: GLASFRSDPS QPLTSRVVTL WYRPPELLLG ATKYGASVDL WSTGCIIAEL FAGSPIMPGS TEVEQIHKIF KLCGSPSEEY WQKSKLAHAS SFKPQHPYKR
401: RLAETFRNFP SSALALVDVL LSVEPDARGT AASALKSEFF TTKPLPCDPS SLPKYVPSKE YDAKLRNEEA RRQRAEAVKG RGAESVRRGS RQSKDVPTPE
501: FKPQAQASLQ GQTNTKCISE KYKPGEDSGS NFRMEPHRGT VPNGLSHSTL MINQNAVGSS EKKVEDEAQL GYGNTFDSSR NKVELRTHGS HMPHGAAGVS
601: NSSHRKDERI SGKESVTGYV PKKNRMHYSG PLMPSGGNIE EMLKDHERQI QEAVRKARID KTQQKL

Best Arabidopsis Sequence Match ( AT4G10010.2 )
(BLAST)

001: MGCICSKGTA EEEVSDQHEK PKENWNKTSS VQLIAPVTSK KDEFSHKSVD GSSGGRKADG LAHKPSARAS GLIVPVDDSD GKTVIVERPT RCHRRWPTAD
101: IGTGGGGFNI FPPSNIPTSV PHSPEAELIA AGWPSWLTSV AGEAIKGWVP RRAESFEKLD KIGQGTYSSV YRARDLETGK MVAMKKVRFV NMDPESVRFM
201: AREINILRKL DHPNVMKLEC LVTSKLSGSL YLVFEYMEHD LSGLALRPGV KFTESQIKCY MKQLLSGLEH CHSRGILHRD IKGPNLLVNN DGVLKIGDFG
301: LANIYHPEQD QPLTSRVVTL WYRAPELLLG ATEYGPGIDL WSVGCILTEL FLGKPIMPGR TEVEQMHKIF KFCGSPSDDY WQKTKLPLAT SFKPQQPYKR
401: VLLETFKNLP PSALALVDKL LSLEPAKRGT ASSTLSSKFF TMEPLPCNVS SLPKYPPSKE LDAKVRDEEA RRKKSETVKG RGPESVRRGS RDFKSTATTP
501: EFVASGQSKD TITTKRFNPQ EDSRTGLRGD RDQKGFSHTN SMIHPSITAT WSKNESCRNN VVELKATRSS NVPMTGRYLS PSHKEDVAVQ TTTTYVRKKN
601: RMHCSGPLMP PGGNIEDILK DHERQIQEAV RKSRLEKSAT RKNNKTCVK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9T0F9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.