Factsheet for VIT_05s0124g00500.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	95.4	90.37
VIT_18s0072g00140.t01	Wine grape	cytosol	49.88	48.7
VIT_07s0141g00280.t01	Wine grape	cytosol	28.81	47.98
VIT_05s0020g01890.t01	Wine grape	cytosol	62.23	44.7
VIT_19s0014g02670.t01	Wine grape	nucleus	76.76	44.52
Bra030962.1-P	Field mustard	plastid	68.77	43.1
CDY25738	Canola	nucleus, plastid	68.77	43.1
CDY02525	Canola	plastid	68.77	43.03
VIT_17s0000g00620.t01	Wine grape	nucleus	61.02	42.93
CDY25881	Canola	plastid	69.98	42.38
Bra038097.1-P	Field mustard	plastid	69.98	42.38
KRH27243	Soybean	nucleus	72.64	42.37
KRH22087	Soybean	nucleus	72.64	42.13
PGSC0003DMT400032406	Potato	nucleus	73.85	42.07
KRH55283	Soybean	nucleus	72.16	41.97
CDY50511	Canola	nucleus, plastid	70.22	41.97
Solyc07g063130.2.1	Tomato	plastid	73.37	41.97
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	58.84	41.75
KRH26151	Soybean	nucleus	72.4	40.9
AT1G53050.1	Thale cress	nucleus, plastid	68.28	40.63
TraesCS3D01G141000.1	Wheat	cytosol	66.83	40.29
HORVU3Hr1G026900.7	Barley	cytosol	66.59	40.2
TraesCS3B01G158600.1	Wheat	cytosol	66.59	40.15
EES02288	Sorghum	cytosol	66.34	39.6
TraesCS3A01G313300.1	Wheat	cytosol	65.86	39.59
Zm00001d008874_P002	Maize	nucleus	65.86	39.02
VIT_18s0001g06780.t01	Wine grape	nucleus	61.5	38.14
Zm00001d039425_P003	Maize	nucleus	65.38	38.14
GSMUA_Achr10P...	Banana	nucleus	68.77	37.82
VIT_12s0035g01180.t01	Wine grape	nucleus	63.44	35.36
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	49.64	34.28
VIT_06s0009g01800.t01	Wine grape	nucleus	41.89	33.46
VIT_17s0000g06650.t01	Wine grape	plastid	54.72	32.94
VIT_14s0108g01270.t01	Wine grape	nucleus	51.82	30.06
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	27.84	24.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	Gene3D:3.40.1190.20	ProteinID:CBI39178	ProteinID:CBI39178.3
UniProt:D7U8W4	EMBL:FN596743	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0046983	GO:GO:0051726	InterPro:IPR000719	InterPro:IPR029056
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF204	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Ribokinase-like	SMART:SM00220	SUPFAM:SSF53613
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE4DBD	ArrayExpress:VIT_05s0124g00500	EnsemblPlantsGene:VIT_05s0124g00500	EnsemblPlants:VIT_05s0124g00500.t01

Description

No Description!

Coordinates

chr5:-:21093620..21098272

Molecular Weight (calculated)

46780.9 Da

IEP (calculated)

8.853

GRAVY (calculated)

-0.162

Length

413 amino acids

Sequence
(BLAST)

001: MGSSGVNFSA LRIKKGPTNQ CVCLVDALGN HTMRPCISSV VKIQAEELTK EDFNGVKWLV MRYGIYNLEV IHAAIQMAKE EGIFVSLDLA SFEIGQGTYS
101: NVYRARDLDK RKIVALKKVR FDNLEQESVR FMAREIHVLR RLDHPNIIKL EGLVTSRMSC SLYLVFEYME HDLAGLASHP GLKFTEPQVK CYMQQLLRGL
201: DHCHSRGVLY RDIKGSNLLI DNSGILKIAD FGLASFFYPH QIQPLTSRVV TLWYRPPELL LGATYYGTVV DLWSTGCILA ELYVGKPIMP GRTEVEQLHK
301: IFKLCGSPSE DYWRKSKLPH ATIFKPQQPY RRCVAETFKD FPTPALGLME TLLSIDPADR GSAASAFKSK FFTVKPLPGA PSSLPKYPPS KEFDAKVRDE
401: EARRWFGTLE DLF

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.