Factsheet for VIT_04s0079g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0124g00500.t01	Wine grape	cytosol	90.37	95.4
VIT_18s0072g00140.t01	Wine grape	cytosol	46.79	48.23
VIT_07s0141g00280.t01	Wine grape	cytosol	26.83	47.18
VIT_19s0014g02670.t01	Wine grape	nucleus	74.08	45.37
VIT_05s0020g01890.t01	Wine grape	cytosol	58.95	44.7
Bra030962.1-P	Field mustard	plastid	65.37	43.25
CDY25738	Canola	nucleus, plastid	65.37	43.25
KRH27243	Soybean	nucleus	70.18	43.22
CDY02525	Canola	plastid	65.37	43.18
PGSC0003DMT400032406	Potato	nucleus	71.79	43.17
CDY25881	Canola	plastid	67.43	43.11
Bra038097.1-P	Field mustard	plastid	67.43	43.11
KRH22087	Soybean	nucleus	70.18	42.98
KRH55283	Soybean	nucleus	69.72	42.82
Solyc07g063130.2.1	Tomato	plastid	70.87	42.8
VIT_17s0000g00620.t01	Wine grape	nucleus	57.57	42.76
CDY50511	Canola	nucleus, plastid	67.2	42.4
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	55.73	41.75
KRH26151	Soybean	nucleus	69.95	41.72
AT1G53050.1	Thale cress	nucleus, plastid	65.83	41.35
HORVU3Hr1G026900.7	Barley	cytosol	63.07	40.2
TraesCS3D01G141000.1	Wheat	cytosol	63.07	40.15
TraesCS3B01G158600.1	Wheat	cytosol	62.84	40.0
EES02288	Sorghum	cytosol	63.07	39.74
TraesCS3A01G313300.1	Wheat	cytosol	62.39	39.59
Zm00001d008874_P002	Maize	nucleus	62.61	39.17
Zm00001d039425_P003	Maize	nucleus	62.39	38.42
GSMUA_Achr10P...	Banana	nucleus	66.06	38.35
VIT_18s0001g06780.t01	Wine grape	nucleus	58.26	38.14
VIT_12s0035g01180.t01	Wine grape	nucleus	60.55	35.63
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	46.56	33.95
VIT_06s0009g01800.t01	Wine grape	nucleus	39.45	33.27
VIT_17s0000g06650.t01	Wine grape	plastid	51.83	32.94
VIT_14s0108g01270.t01	Wine grape	nucleus	48.85	29.92
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	26.38	24.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	Gene3D:3.40.1190.20	ProteinID:CCB51127	ProteinID:CCB51127.1
UniProt:F6HFX5	EMBL:FN595753	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726
InterPro:IPR000719	InterPro:IPR029056	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF204	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Ribokinase-like
SMART:SM00220	SUPFAM:SSF53613	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002108A85	ArrayExpress:VIT_04s0079g00700
EnsemblPlantsGene:VIT_04s0079g00700	EnsemblPlants:VIT_04s0079g00700.t01	:	:	:	:

Description

No Description!

Coordinates

chr4:+:11555497..11560203

Molecular Weight (calculated)

49332.9 Da

IEP (calculated)

7.890

GRAVY (calculated)

-0.124

Length

436 amino acids

Sequence
(BLAST)

001: MGSSGVNFSA LRIKKGPTNQ CVCLVDALGN RTMRPCLSSV VKIQAEELTK EDFKGVKWLV MRYGIYNLEV IHAAIQMAKE EGIFVSLDLA SFEIGQGTYS
101: NVYRARDLDQ RKIVVLKKVR FDNLEQESVR FMAREIHVLH RLDHPNIIKL EGLVTSRMSC SLYLVFEYME HDLEGLASHP GLKFTEPQVK CYMQQLLRGL
201: DHCHSRGVLY RDIKGSNLLI DNSGILKIAD FGLASFFDPH QIQPLTSIVV TLWYRPPELL LGATYYGTVV DLWSTGCILA ELYAGKPIMP GRTEVEQLHK
301: IFKLCGSPSE DYWRKSKLPH ATIFKPQQPY RRCVAETFKD FPTPALGLME TLLSIDPADC GSAASAFKSE FFTVKPLPGD PSSLPKYPPS KEFDAKVRDE
401: EARSYYAPSI ADTSYHSICW ILMVRNFRGT LLELLQ

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.