Factsheet for VIT_14s0108g01270.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g06650.t01	Wine grape	plastid	56.6	58.75
KRG93581	Soybean	plastid	46.77	56.83
KRH18441	Soybean	nucleus	46.49	56.39
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	51.69	56.01
GSMUA_Achr6P24660_001	Banana	nucleus	51.26	55.98
PGSC0003DMT400003634	Potato	plastid	51.4	55.2
PGSC0003DMT400076796	Potato	nucleus	50.98	53.54
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	49.72	53.47
GSMUA_Achr4P03350_001	Banana	nucleus	49.02	52.32
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	50.98	51.93
VIT_05s0124g00500.t01	Wine grape	cytosol	30.06	51.82
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	47.75	51.2
GSMUA_Achr2P13490_001	Banana	nucleus	46.77	51.15
TraesCS2B01G209300.1	Wheat	plastid	49.44	50.87
TraesCS2A01G182800.1	Wheat	plastid	49.3	50.72
TraesCS2D01G190600.1	Wheat	plastid	49.3	50.72
HORVU2Hr1G034440.3	Barley	plastid	49.44	50.65
OQU90194	Sorghum	plastid	50.28	50.56
GSMUA_Achr4P28060_001	Banana	nucleus	47.47	50.22
KRH44946	Soybean	nucleus	47.75	50.15
Os07t0596600-02	Rice	plasma membrane	49.72	50.07
AT5G39420.1	Thale cress	nucleus	45.22	50.0
Bra028432.1-P	Field mustard	nucleus, plastid	45.65	49.92
CDY37004	Canola	nucleus	45.08	49.38
Zm00001d006759_P012	Maize	plastid	49.86	49.24
KRH01235	Soybean	nucleus, plastid	46.49	49.18
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	29.92	48.85
VIT_05s0020g01890.t01	Wine grape	cytosol	39.19	48.52
VIT_07s0141g00280.t01	Wine grape	cytosol	16.85	48.39
CDX74282	Canola	plastid	42.28	48.31
AT3G01085.3	Thale cress	plastid	42.28	47.7
Zm00001d022041_P001	Maize	plastid	49.58	47.13
VIT_18s0072g00140.t01	Wine grape	cytosol	27.95	47.04
CDX74463	Canola	nucleus	40.45	46.91
CDY55799	Canola	plastid	41.29	46.89
CDY34698	Canola	plastid	41.29	46.74
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	38.2	46.74
VIT_17s0000g00620.t01	Wine grape	nucleus	36.1	43.78
Bra041128.1-P	Field mustard	plastid	32.44	43.26
VIT_18s0001g06780.t01	Wine grape	nucleus	38.9	41.59
VIT_19s0014g02670.t01	Wine grape	nucleus	40.73	40.73
VIT_12s0035g01180.t01	Wine grape	nucleus	40.31	38.73
VIT_06s0009g01800.t01	Wine grape	nucleus	26.12	35.98
CDX67429	Canola	cytosol, plastid	45.37	34.81
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	28.23	33.61
CDX91965	Canola	nucleus	42.98	29.54
CDY37546	Canola	nucleus	42.98	29.25
Bra001023.1-P	Field mustard	nucleus	43.54	29.14
Bra039147.1-P	Field mustard	nucleus	42.98	28.28
CDY43266	Canola	nucleus	40.17	26.8
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	17.13	26.24

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100268091	wikigene:100268091	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ProteinID:CCB47583
ProteinID:CCB47583.1	ncoils:Coil	UniProt:F6H5W2	EMBL:FN595239	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100268091	wikigene:LOC100268091	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF188	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001984C8B	ArrayExpress:VIT_14s0108g01270
EnsemblPlantsGene:VIT_14s0108g01270	EnsemblPlants:VIT_14s0108g01270.t01	unigene:Vvi.22425	RefSeq:XP_002278818	RefSeq:XP_002278818.1	SEG:seg

Description

No Description!

Coordinates

chr14:-:29909780..29915076

Molecular Weight (calculated)

80709.6 Da

IEP (calculated)

9.257

GRAVY (calculated)

-0.675

Length

712 amino acids

Sequence
(BLAST)

001: MGCISSKHAV SASPDFDISE AIEDDWSVIS ASSFKQRRGS RGASVKKAKK VRKERKEEKE EKEEKEKDKD KESEEEKEEE EPKDNEGLEL QRSKKGSVNG
101: KSTFSVRFGN LHKVEAEQII AGWPSWLSAA AGEAIHGWLP LRADSFEKLE KIGQGTYSTV YRARDVETGR IVALKKVRFD NFQPESVMFM SREITILRRL
201: DHRNIMKLEG IITSRLSCSI YLVFEYMEHD LAGLVSCPDI KFSVAQVKCY MQQLLSAIEH CHLLGVMHRD IKASNILVNN EGVLKLADFG LANILRPKHK
301: QILTSRVVTL WYRPPELILG STSYGVSVDL WSVGCVFAEL LIGKPLFKGR TEVEQLHKIF KLCGSPPDEY WKKSKFPHAT MFKPHHSYES TLRERFREYP
401: TTALNLIETL LSVEPPKRGT ASSALISEYF NTKPYACEPS SLPKYPPNKE IDAKCREEAR RKTGGVGVRG SGALRKPRRS RTSSQEPNST SKFAVTESNT
501: QYSRRNSGSS SAHISKGKGR GFDYGDSEKP SFETSSQISQ VSNVSRGDFL FQVPKQITAP CSFAWAAKRR KEHTAPPRTY SRCSSRYSAV ETLDVVDENS
601: ALEFQDRVSG EGLSGLRSQG RDEMAKPMRK QRIQFDSFDT SDLYHSQEFA AAVHQGELAR RHNLGLKDHP DRVEFSGPLL CEPHRVEEHL QRRESQIRQA
701: TQIPWLQKLY ED

Best Arabidopsis Sequence Match ( AT1G18670.3 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKTMMLI TNKKKRMFYD

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.