Factsheet for Solyc02g088330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003634	Potato	plastid	96.5	95.63
KRG93581	Soybean	plastid	51.14	57.34
KRH18441	Soybean	nucleus	50.53	56.56
Solyc03g115660.2.1	Tomato	nucleus	55.1	52.39
GSMUA_Achr6P24660_001	Banana	nucleus	51.45	51.84
VIT_14s0108g01270.t01	Wine grape	nucleus	56.01	51.69
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	50.99	50.6
GSMUA_Achr2P13490_001	Banana	nucleus	49.77	50.23
GSMUA_Achr4P28060_001	Banana	nucleus	51.14	49.93
GSMUA_Achr4P03350_001	Banana	nucleus	50.38	49.63
KRH44946	Soybean	nucleus	51.14	49.56
AT5G39420.1	Thale cress	nucleus	48.55	49.53
KRH01235	Soybean	nucleus, plastid	50.53	49.33
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	49.47	48.95
Bra028432.1-P	Field mustard	nucleus, plastid	48.4	48.85
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	51.9	48.78
CDY37004	Canola	nucleus	47.95	48.46
TraesCS2A01G182800.1	Wheat	plastid	50.99	48.41
TraesCS2D01G190600.1	Wheat	plastid	50.84	48.27
TraesCS2B01G209300.1	Wheat	plastid	50.68	48.12
HORVU2Hr1G034440.3	Barley	plastid	50.84	48.06
OQU90194	Sorghum	plastid	51.6	47.88
Os07t0596600-02	Rice	plasma membrane	50.68	47.1
Zm00001d006759_P012	Maize	plastid	51.29	46.74
CDX74463	Canola	nucleus	43.07	46.09
Solyc04g051460.2.1	Tomato	cytosol	32.88	45.76
CDX74282	Canola	plastid	42.92	45.26
Zm00001d022041_P001	Maize	plastid	51.6	45.26
CDY55799	Canola	plastid	42.92	44.98
Solyc01g098160.2.1	Tomato	nucleus	39.27	44.87
AT3G01085.3	Thale cress	plastid	43.07	44.85
CDY34698	Canola	plastid	42.47	44.36
Solyc01g067640.2.1	Tomato	nucleus	38.66	43.79
Solyc03g097690.2.1	Tomato	cytosol	37.9	43.61
Bra041128.1-P	Field mustard	plastid	33.49	41.2
Solyc11g045610.1.1	Tomato	nucleus	39.88	40.94
Solyc10g008280.2.1	Tomato	nucleus	41.4	40.0
Solyc04g071920.1.1	Tomato	nucleus	34.09	39.37
Solyc07g063130.2.1	Tomato	plastid	42.31	38.5
Solyc06g064660.2.1	Tomato	endoplasmic reticulum, plasma membrane	39.73	38.05
Solyc07g053910.2.1	Tomato	nucleus, plastid	41.4	37.99
Solyc04g056280.2.1	Tomato	nucleus	27.7	35.55
Solyc01g103350.2.1	Tomato	nucleus	39.12	35.11
Solyc06g073630.2.1	Tomato	nucleus	26.64	34.59
CDX67429	Canola	cytosol, plastid	48.1	34.05
CDY37546	Canola	nucleus	44.29	27.82
CDX91965	Canola	nucleus	43.53	27.61
Bra001023.1-P	Field mustard	nucleus	43.99	27.16
Bra039147.1-P	Field mustard	nucleus	44.29	26.89
CDY43266	Canola	nucleus	41.86	25.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726
InterPro:IPR000719	UniProt:K4BBY9	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc02g088330.2	EnsemblPlants:Solyc02g088330.2.1	UniParc:UPI00027684E7	SEG:seg

Description

No Description!

Coordinates

chr2:-:50460535..50467005

Molecular Weight (calculated)

73539.2 Da

IEP (calculated)

9.709

GRAVY (calculated)

-0.626

Length

657 amino acids

Sequence
(BLAST)

001: MGCVSSKQAT SHSPPHDSSV NVAGVDNVDP LLHIGFAPLE KIKEEPEKEG EDSVRRFSGK LRASKKGNSD KKAASFSIKF GRLTEGEHLA AGWPVWLTAV
101: AGEAIDGWMP LKSNMFQKLE KIGQGTYSSV YRARDIGNGK MVALKKVRFD NFQPDSVRFM AREIAILRKL DHPNIMKLEG IITSRLSCSI YLVFEYMEHD
201: LSGLLSCPDI KFSDSQIKCY MQQLLSGLEH CHSRGIMHRD IKVSNILVNN EGTLKIADFG LANFLSARHK QPLTSRVVTL WYRPPELLLG STSYGVTVDL
301: WSVGCVFAEL FFGRPLLKGR TEVEQLHKIF KLCGSPPEDY WKRSKLPLAT MFKPKQPYDS TLRDRCKELP KSAVNLIETL ISIDPHKRGT ASSALNSEYF
401: NTKPYACDSS SLPKYPPNKE IDAKFREEAR RKRASSTVQT SETSKNSRKS RKGLQEPNNF CKVVPTEEVE ANVHGSHRNY GSNAQISKGR RATVSRISMK
501: PLYDTVSDAA SQMTDESQGD STVLSVPVQM PESSGFAWAK KGKQDSAVTR LYPPPNSRSQ KLSAFDPSAV LHSGDTLESK MQDNDEFLRR TQHRKHGHHE
601: RPDSFDLSDQ EQSAEFDGQQ GRVGFSGPLL SQSQTFDSKK DSQTRKAGRR SRFYGDI

Best Arabidopsis Sequence Match ( AT1G18670.3 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKTMMLI TNKKKRMFYD

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.