CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006759_P012	Maize	plastid	92.51	90.85
Zm00001d022041_P001	Maize	plastid	88.7	83.85
Os07t0596600-02	Rice	plasma membrane	83.05	83.17
TraesCS2A01G182800.1	Wheat	plastid	80.65	82.51
TraesCS2D01G190600.1	Wheat	plastid	80.37	82.23
HORVU2Hr1G034440.3	Barley	plastid	80.65	82.16
TraesCS2B01G209300.1	Wheat	plastid	80.08	81.94
CDY71137	Canola	plastid	40.54	65.83
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	59.75	63.9
GSMUA_Achr6P24660_001	Banana	nucleus	57.06	61.96
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	59.46	60.23
VIT_17s0000g06650.t01	Wine grape	plastid	58.19	60.06
GSMUA_Achr4P03350_001	Banana	nucleus	56.21	59.67
KRH54601	Soybean	plastid	56.78	59.2
KRH63286	Soybean	nucleus	56.07	58.9
Solyc03g115660.2.1	Tomato	nucleus	57.06	58.47
PGSC0003DMT400063133	Potato	nucleus	56.92	58.07
KRH56877	Soybean	nucleus, plastid	53.95	57.01
KRH03527	Soybean	nucleus, plastid	54.66	57.0
CDX73077	Canola	cytosol	49.44	54.77
CDX83825	Canola	plastid	54.24	54.7
Bra015920.1-P	Field mustard	cytosol	49.29	54.62
CDX96534	Canola	cytosol	49.15	54.46
CDX81891	Canola	plastid	53.11	53.87
AT1G18670.3	Thale cress	nucleus	54.38	53.47
AT1G74330.1	Thale cress	nucleus	52.26	52.93
KRG93581	Soybean	plastid	43.36	52.39
KRH18441	Soybean	nucleus	43.36	52.3
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	33.05	52.12
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	47.88	51.6
CDX96706	Canola	nucleus	53.81	51.42
Bra016547.1-P	Field mustard	nucleus	53.53	51.08
VIT_14s0108g01270.t01	Wine grape	nucleus	50.56	50.28
PGSC0003DMT400003634	Potato	plastid	47.03	50.23
KXG32500	Sorghum	plastid	39.27	49.91
OQU92600	Sorghum	nucleus	39.69	49.82
KXG36890	Sorghum	plastid	39.55	48.95
PGSC0003DMT400076796	Potato	nucleus	46.19	48.23
AT5G39420.1	Thale cress	nucleus	43.79	48.14
KRH01235	Soybean	nucleus, plastid	45.2	47.55
Bra028432.1-P	Field mustard	nucleus, plastid	43.64	47.47
CDY37004	Canola	nucleus	43.5	47.38
KRH44946	Soybean	nucleus	44.92	46.9
KXG23797	Sorghum	plastid	45.62	45.95
CDX74463	Canola	nucleus	38.98	44.95
CDX74282	Canola	plastid	38.98	44.3
EES02288	Sorghum	cytosol	42.94	43.93
CDY34698	Canola	plastid	38.98	43.88
CDY55799	Canola	plastid	38.7	43.7
AT3G01085.3	Thale cress	plastid	38.56	43.26
EES04133	Sorghum	cytosol, plasma membrane, plastid	33.9	43.09
EES15089	Sorghum	cytosol	18.93	41.49
EES15821	Sorghum	mitochondrion	37.57	41.18
Bra041128.1-P	Field mustard	plastid	29.66	39.33
KXG24243	Sorghum	nucleus	41.53	39.04
EES05258	Sorghum	nucleus	37.99	38.7
EER93534	Sorghum	cytosol	26.98	37.3
EES18167	Sorghum	nucleus	26.55	36.43
EER88844	Sorghum	vacuole	28.25	35.21
CDX67429	Canola	cytosol, plastid	43.64	33.3
OQU76929	Sorghum	nucleus	32.77	31.78
CDX91965	Canola	nucleus	40.68	27.8
Bra001023.1-P	Field mustard	nucleus	40.82	27.16
CDY37546	Canola	nucleus	39.69	26.86
Bra039147.1-P	Field mustard	nucleus	39.69	25.97
CDY43266	Canola	nucleus	36.44	24.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EntrezGene:8060631	UniProt:C5XD78	ProteinID:EER99633.2
ProteinID:EER99651.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EnsemblPlants:OQU90194	ProteinID:OQU90194	ProteinID:OQU90194.1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3002G362900	SUPFAM:SSF56112	unigene:Sbi.10976	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A83CA6	RefSeq:XP_002463130.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:72404436..72410594

Molecular Weight (calculated)

78860.6 Da

IEP (calculated)

10.070

GRAVY (calculated)

-0.563

Length

708 amino acids

Sequence
(BLAST)

001: MGCVASKNAV SVTPAADSSG GLRDRSQPRA QESAAPVPLP VPVSSSLRST SSAARRSEKV KEEAEEPGKA AVVVPAASRS FRLRSLRKSL EGEQVAAGWP
101: PWLSAVAGEA IQGWIPLKAD SFEKLEKVGQ GTYSSVFRAR DLETGKIVAL KKVRFDNFEP ESVRFMAREI QILRRLDHLN VMKLEGLITS RLSCSLYLVF
201: EYMEHDLAGL CSSPDIKFTE AQLKCYMNQL LSGLEHCHSR RVVHRDIKGA NLLVNNEGVL KIADFGLANF FDPSKNHPLT SRVVTLWYRP PELLLGSTHY
301: DAAVDLWSVG CVFAEMYRGK PILQGRTEVE QLHKIFKLCG SPADDYWKKS KLPHATIFKP HHPYPSTLGE VFKVVPENAL SLLETLLSVE PYKRGTASGA
401: LSSEFFRTKP YACEPSSLPK YAPNKEMDAK LREDALRRKA SSRGHGTEAS KKSSRLSRAA REPIAVPKQI ISSTEESKTN VNATKDGTIQ DRTKLNGDAR
501: LFADIQPVSA AQVKESARHV KNESREEIPF SGPLSVSSSS GFAWAKRPQE DRSFARSRTR SSSRGQFPAL VGQDCKTQAK ENDGLRELPS RDIHVSISRV
601: NSKVQDREPH DAAKRAVLKK WSQLERPDSF DSCDTYRSQN FSNAMFLGGT LSSKNSFKGD HGQEEKVEYS GPLLSQSHKV DELLQKNERH IRQVVRTSWF
701: RRGRKVDK

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.