CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041514_P002	Maize	plastid	86.06	82.76
Zm00001d000147_P006	Maize	nucleus, plastid	86.63	82.63
HORVU5Hr1G020060.7	Barley	nucleus	66.86	69.02
TraesCS5B01G081500.1	Wheat	nucleus	66.29	68.83
TraesCS5A01G075200.1	Wheat	nucleus	66.15	68.79
TraesCS5D01G088700.2	Wheat	nucleus, plastid	64.44	63.18
Os12t0577700-00	Rice	plasma membrane	60.17	57.16
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	31.58	49.44
OQU92600	Sorghum	nucleus	37.98	47.34
KXG32500	Sorghum	plastid	36.98	46.68
KXG36890	Sorghum	plastid	37.13	45.63
OQU90194	Sorghum	plastid	45.95	45.62
EES15089	Sorghum	cytosol	19.06	41.49
EES02288	Sorghum	cytosol	40.4	41.04
EES04133	Sorghum	cytosol, plasma membrane, plastid	31.86	40.22
EES15821	Sorghum	mitochondrion	34.28	37.31
EES05258	Sorghum	nucleus	36.13	36.55
KXG24243	Sorghum	nucleus	39.12	36.52
EER93534	Sorghum	cytosol	25.6	35.16
EER88844	Sorghum	vacuole	28.16	34.86
EES18167	Sorghum	nucleus	25.18	34.3
OQU76929	Sorghum	nucleus	31.86	30.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	UniProt:A0A1B6PDU3	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	EnsemblPlants:KXG23797	ProteinID:KXG23797	ProteinID:KXG23797.1	ProteinID:KXG23798.1	InterPro:Kinase-like_dom_sf
ProteinID:OQU79412.1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3008G141300	SUPFAM:SSF56112
unigene:Sbi.20696	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00081ACA5F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:57223685..57227690

Molecular Weight (calculated)

76578.3 Da

IEP (calculated)

9.822

GRAVY (calculated)

-0.451

Length

703 amino acids

Sequence
(BLAST)

001: MGCAASRHGA VSSPSYDVSS CSYNMSRSAS ASADLGGSSS ALSIWSRRPV RLEAFDNDAD DNERRRRSGR EAAAAAAAAV TATAVPTVRL GNVRRCLEGE
101: QAAAGWPSWL SAVAAEAVHG WVPLRADSFE KLEKVGQGTY SSVFRARELA TGRLVALKKV RFDSVEPESV RFMAREILIL RRLRGHPNVV GLEGLITSRS
201: SSSIYLVFEY LEHDLAGLNS SADITFTEPQ IKCYMRQLLE GLAHCHARGV MHRDIKCANL LVSNGGELKV ADFGLANLFT PASTAPLTSR VVTLWYRPPE
301: LLLGATAYEP TVDLWSAGCV FAEMHARRPV LQGRTEVEQI HKIFKLCGSP PDDFWRRSGI SHAAVFRPQQ PYPSRLRDTF AASMPDHAFR LLATLLSLDP
401: AARGTAAAAL DSEYFTTAPY ACSPASLPKY APNKEMDAKF REESRRRSNL RSQGGEAARR MSRGHKSMQL QDTNQSHVHA EESLPVVAEN GAAVARNDGG
501: ESRLFVDLEP VPAISKRPDD GDHAAPCART MSTSFKEPPR NADRVPLSGP VQLAASTGFA WAKKPRPDAA AVTKRSGSKE TGANNNSNGG DGARTTSTTA
601: AAAPAAAAAP YEVEKQEMIK QWAQVADAFS ASEAYNSRFR QTLDAKQLKT GKMYKGKVNR VDYSGPLLSQ PRRIDELLHN HEQQIRQAGR RSWFKKGSKK
701: EQP

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.