Factsheet for Os12t0577700-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0668000-00	Rice	cytosol, plasma membrane	2.84	67.74
TraesCS5B01G081500.1	Wheat	nucleus	57.84	63.22
HORVU5Hr1G020060.7	Barley	nucleus	58.11	63.14
TraesCS5A01G075200.1	Wheat	nucleus	57.43	62.87
KXG23797	Sorghum	plastid	57.16	60.17
TraesCS5D01G088700.2	Wheat	nucleus, plastid	56.89	58.72
Zm00001d041514_P002	Maize	plastid	56.22	56.91
Zm00001d000147_P006	Maize	nucleus, plastid	56.62	56.85
Os01t0367700-01	Rice	plasma membrane	32.43	43.01
Os07t0596600-02	Rice	plasma membrane	40.14	42.01
Os01t0925700-01	Rice	cytosol	19.86	39.62
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	17.03	39.38
Os11t0242500-01	Rice	mitochondrion	28.11	35.92
Os02t0304500-00	Rice	plastid	24.46	34.74
Os08t0112500-01	Rice	nucleus	34.32	33.96
Os01t0958000-01	Rice	plasma membrane	23.11	33.33
Os02t0559300-02	Rice	plasma membrane	32.16	32.65
Os05t0389700-01	Rice	nucleus	22.57	32.18
Os01t0201000-01	Rice	plasma membrane	0.81	4.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	UniProt:A0A0P0YBP9	ProteinID:BAT17789.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os12g0577700	EnsemblPlants:Os12t0577700-00
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000393AC27
SEG:seg	:	:	:	:	:

Description

CDK-LIKE 1, cyclin-dependent kinase-like 1Similar to Protein kinase domain containing protein, expressed. (Os12t0577700-00)

Coordinates

chr12:-:23885845..23888835

Molecular Weight (calculated)

78648.7 Da

IEP (calculated)

9.383

GRAVY (calculated)

-0.369

Length

740 amino acids

Sequence
(BLAST)

001: MGCAASKGAA VASPAYEATT TSSSSASAAY SVSRSASTGA AAAEVASIWS RPVRLDAYED DGDGKKKAAA RGGGECSSVV VVGGGVRLGN IHRYVEAEQV
101: AAGWPSWLSA AAAEAVHGWV PLKAANYEKL DKIGQGTYSS VFRARNVETG RMVALKKVRF DSGEPESVRF MAREILILRR LHRHPNVVSL DGLITSRSSP
201: NLYLVFDYSD HDLAGLSSDP SLSFSLPEIK CYMRQLLLGL EHCHARGVMH RDIKCANLLV SGGGELKVAD FGLANVFDAS SAAAMTSRVV TLWYRPPELL
301: LGATAYDASV DLWSAGCVFA EMHARRPILQ GRTEVEQIHR IFKLCGSPGD AYWRRAAAGG GGGAGFRPQQ PYESRLRETF GGMMGDDAFA LLSKLLSVEP
401: SARGTATEAL ASEYFRTEPY ACEPSSLPKY APNKEMDAKL REDSRRRVNV GGRNHGGVGG GEATKRLSRG HKSMQDTTAA ATAAAVVASQ RHGHGHVHAE
501: ESLPRANGGE ARLFVDMQPV PVIASKRHDD PTPPPPPPPM SRSYQDDAGD RLPLSGPVQL TASTGFAWAK MPRPDSTTTA AAAAKRSSSK VPRTNSNGGA
601: YEAEKQEAMK QWAQVADAFT SSESYNNRFK EPTATAGAGA AAATKEVKSS KVSSPSDHFH HCRNPSSPAI SLTIFPPLAE AQGRRREVAQ GGILRAVAVA
701: AAAHRGAPPE PRAADPASWP PLVVPQRQQE GAAMRKTDMA

Best Arabidopsis Sequence Match ( AT1G18670.2 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLV RL

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.